Oncorhynchus nerka (sockeye salmon): 115146173
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Entry
115146173 CDS
T07952
Name
(RefSeq) transforming acidic coiled-coil-containing protein 3-like isoform X1
KO
K14283
transforming acidic coiled-coil-containing protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115146173
03036 Chromosome and associated proteins [BR:
one03036
]
115146173
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115146173
mRNA cycle factors
P-body specific factors
115146173
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Sister chromatid separation proteins
TACC proteins
115146173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TACC_C
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
115146173
NCBI-ProteinID:
XP_029543934
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All DBs
Position
LG18:28958247..28969584
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AA seq
934 aa
AA seq
DB search
MSSTAVNDENRGICPGRKHSNSETSCDIFSLDQPTGRPSILRQSQAENLSNKTIGKGGKV
CFQTPRRDPHTKRIESPTKSLKMASIDYCTKALESLQLTTPEEVLLQEINVPVDVPKSDF
SDVSSYPDDDMPIQSKGGYQLDFDNLDVINPFQGSGKMVLSPARHSELVETSKAVNLSEP
NIAEAVSHEKMSDDFDKIETALDETLPFMPSLENSLADISADVRSTDSSVVTMTKDPAIE
LSKADEDETVQSSVNLNPDQAVDISRDKETPLPPKGSYKFDFDDLDSVNPFQTGASQIQN
SPILGRKLPCNDPPEVEVEETAPAGKEMGPAAMVRVSQPVVLAPVQPEMRAIAPLSPAPK
ETSQPAEDSMPQPGEAAPNAGPVKLEFNFDDGGEIKRKPLPKRFVKRPPGLKPSEKKAVP
EEKKEPLSKESPVMPAVSDSDIPVPKCLYNFDKFDDPDFNPFGTNARMSDSIVCKVKSSS
EAEGSNSVRVAASPDKVTEPVQKDTAPWPLLPSAGDQISRTEPDLSATREGIDNIPAEAA
DLVESCEVQYPLSGQEQEPPTEPDQPSLSTLEPFELCPFEQNPQNGMSEFNEFVPGTTFM
ANDFDGQMDYLEQFGSSNFKESALRKQSLYLKFDPLMRESPKKSGGPTGLDNLPQPDAFA
SRVDTQKTGAKEEVNGVNGLKSLNPKLIDVPPPVQVVGPMTPLVQNSPMNLASTFPQPAN
TEDNIIEVLKYSQQDMDAAIAKIQKEVKEQEAQWKAKHDKLSWDNHAMGKIMSEFEATIA
QILADKQREKEMAQAEITKVLQEKEQVSQDLNTMERSFSELFKRLDKYKEAIEGYKKNEE
ILKKCAQDYLARIKKEEQRYQTLKVHAEQKIGLANGEIAEVRSKLKSEVSALQAQLRREQ
LKVQSLENSLDQKVKETEELTNLCDELIAKVQKG
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagttctactgctgtgaacgatgagaatcgtgggatctgccctggaagaaagcacagc
aattcagagacaagttgtgacatcttttccttggatcagccgactgggaggccatccatc
cttcgccagtctcaggcagagaacctgtccaacaaaactataggaaagggagggaaggtt
tgttttcagactccaagaagagaccctcacactaagagaatagaatcaccaacaaagtcc
ctcaagatggcaagcatagattactgtacaaaagccctagagtctctgcagcttacaaca
cctgaagaggtgttgctgcaggaaatcaatgtgcctgttgatgtgccaaaatcagacttt
tcagatgtgtcatcctatcctgatgatgacatgccaattcagagtaaaggaggttatcag
ctggattttgataaccttgatgtcatcaatcccttccaagggtctggtaaaatggtcctc
tctccagcaaggcacagtgaactagttgaaacctccaaggctgttaatctgagtgaacct
aatatagctgaggcagtttctcatgagaagatgtcagatgattttgacaagattgaaacg
gcactggatgagaccctcccgttcatgccatcactggaaaattctctcgctgacatctca
gctgatgtgcgttcaacagatagcagtgtggtcaccatgacgaaggatccagccattgag
ttatccaaagctgatgaggacgagactgtacagtcatccgttaaccttaacccagatcaa
gctgtcgacatctctagagataaggagactcctctgccgcccaaaggttcttacaaattc
gattttgacgaccttgattccgtcaatcctttccaaacaggagcctcccaaattcagaat
tcccccatacttggtagaaagctgccatgcaatgaccctccagaggtggaagttgaagag
actgcccctgctggtaaggaaatgggacctgcagccatggttcgggtgtctcagccagtt
gtattggcacctgtccagccagagatgagagctattgcaccattgtcacctgctcccaag
gagacgagccagcccgctgaagactccatgcctcagccgggtgaagctgctcccaatgcc
gggccagtgaaacttgagttcaatttcgatgatggcggggagatcaaacgtaagcctctt
cccaagcggtttgtcaaaaggcctcctggtcttaagccttcagagaaaaaggctgtacct
gaggaaaagaaagaacctctatctaaggaatctccagtgatgccagcggtcagtgattct
gatattcctgttccgaaatgcctgtacaactttgacaagtttgatgacccagacttcaat
ccatttggtacaaatgcaagaatgagtgactctatagtctgtaaggtgaaatccagttca
gaggccgagggatcaaactcagtcagggtggctgcctcccctgataaagtgacggagcct
gttcagaaagacaccgcaccatggccacttcttcctagtgctggagaccaaatctcaagg
actgaacctgatctttctgccacaagagaaggaattgacaacattccagctgaagctgct
gatcttgtggaatcatgtgaagttcaatatcctttgtctggccaagagcaggaacctcca
actgaacctgaccaaccttcactgagcaccctagaaccctttgaactctgcccatttgag
cagaacccacaaaatggcatgtcagaatttaatgagtttgttcctggaaccacattcatg
gcgaatgactttgatggacagatggactacctggagcagtttgggtccagcaatttcaag
gagtcagcactgaggaaacaatctctgtacctcaaatttgaccccctcatgagagaaagc
cccaagaagtctggaggccccacaggactcgacaacctccctcaaccagatgcctttgct
tcacgtgtggatacccagaagactggtgctaaggaggaagtgaatggggtgaatggactg
aaatctctcaaccccaaacttattgatgtcccaccacctgttcaggttgttggtcctatg
actcctcttgtgcaaaattcccctatgaatctagcctcaactttcccccaaccagccaac
actgaggataacatcatagaggtgcttaaatacagtcagcaagatatggatgctgccatt
gccaagatccagaaagaagtaaaggaacaggaagctcaatggaaggcaaagcatgacaag
ctgtcttgggataatcatgcaatggggaaaatcatgtctgaatttgaagccacaattgct
cagatattggctgataaacaaagggagaaggagatggcccaggctgagatcactaaagtc
ttgcaggagaaggagcaggtatcacaggacctgaacaccatggagaggtccttctctgag
ctcttcaagagactggacaagtacaaagaggccatcgagggttacaaaaagaatgaagag
attctgaagaaatgtgctcaagattacctggctaggatcaagaaggaggagcagcgctac
cagaccctgaaagtccatgcagagcagaaaattggcctggcgaatggagagattgcagag
gttcgctccaaactaaagtcggaggtctctgcacttcaggcccagctgcgcagagagcag
ctaaaggtccagtcactggagaatagccttgaccagaaagtaaaagagactgaagaactc
accaatctttgcgatgagctaattgctaaagtccagaagggctga
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