Oncorhynchus nerka (sockeye salmon): 115146175
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Entry
115146175 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: lateral signaling target protein 2 homolog
KO
K24780
lateral signaling target protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115146175
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Others
Others
115146175
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Gene cluster
GFIT
Motif
Pfam:
FYVE
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
115146175
NCBI-ProteinID:
XP_029543939
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All DBs
Position
LG18:complement(29050482..29109049)
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AA seq
982 aa
AA seq
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MNRFRKWLYKPKRTDPQLLAQFYYADEELNQVATELDSLDGRKEPQRCTLLVNQFRSCQD
NVLNVINQIMDECIPGDRANRDFCVKFPEEIRHDNLAGQLWFGAECLAAGSIIMNREIES
MAMRPLAKDLTHSLEEVRNITRDQALRDLNFYTDRMRDTLRHFDSLFAEFELSYVSAMVP
VKSPKEYYVQQDVIVLFCETVERALKLGYLSQDMIDDYEPALMFTIPRLAIVCGLVVYGE
GPLNLDRKPGDMSELFRPFRTLLKKIRDLLQTLSEEELLTLERSLCISQDGFPLVPELPP
TPDPLSSSSPTGDIPEEPTESEQQEVLSLCISHIQDEEDRQWEEVERGGEEERGGLCEEA
EEADQACSMQYDEEEIEQLNMMVHRVGDEMFTLLSPPSQGQSPAHRPNRGGSIGGSSTEA
SPIRVLVGQGRTGLYHEEEDRVFFMEDLDAGGDLVTSSRLTSPSNLAPQPSSPQPSRSGP
LTDSSRNGWPTEAQSDLSQQPHSHPSQCPSTKRPSPSPGREPLPYTNGWEVGLEGAETAE
VIAHRMGGMKLSATVIFNPHSPSLTEMAVDKLLLPRPLSSSETEPCAPLVATNCLLNSCV
CCGSCEVGHDDTLTMDTTGLGMGLGLDQHCKPHSSVIQSSACRLASSGHDLHGKGDSPPS
RCSSEPAPGVEEGDQHCDQCLVVVAPAPQQCLGQNRSPIGVRGTPEPCSHQCRTVRRPQA
SGGRDRTGTREADSESKEEIKKNTSFFQDSPLSSVSSSDCESVSVTTCSLSSSAYTASPV
SSLTTSSGTSEDLDRHEIQLALQAAKMAARNKIRSRFHSSSDLIHRLFVCISGVADQLQT
NYAADLRSILKTLFEVMATSEQGDNDKEKACPGLRSAVLEDCFLCQETISSSELAAKALD
GQFEDPPDWVPDEECDSCITCKAPFTVIRRKHHCRSCGKIFCSRCSSHSAPLPRYGQVKA
VRVCTHCYMFHVTPFYSDKTGI
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgatttcgaaagtggctttacaagcctaagaggacggaccctcagctcctggcc
cagttctactatgctgatgaggagctcaatcaggtggccacagaactggacagcctagat
gggaggaaggagcctcagaggtgtacgctgctggtcaaccagttcagatcctgtcaggac
aatgtgttgaacgttatcaaccagatcatggatgaatgtatccctggcgacagagccaac
agagacttctgtgtcaagttcccagaggagattcgccatgacaacctggctggacagctg
tggtttggggctgagtgtctggctgcaggctccatcatcatgaacagggagatagagagc
atggccatgaggcctctcgccaaggacctgacccatagtctggaggaggtccgtaacatc
acgcgagaccaggccctccgagacctcaacttctacacagaccgcatgagggacacgctg
cgccacttcgacagcctctttgctgagtttgagctcagctatgtatcagccatggtgcct
gtgaagtctcccaaagaatactatgttcagcaggatgtgattgtgctcttctgtgagact
gtggagagggcgctcaagctgggctatctcagccaagacatgatcgatgactatgaaccc
gctctgatgtttacaatccccagactagccattgtgtgtggtctggtggtgtacggtgaa
ggtccactcaacctggataggaaaccaggggacatgtctgagctcttccggcccttccgt
actttactgaagaagatcagggacctgctccagaccctgtcagaggaggagttgttgaca
ctggagcggagcctctgtatctctcaggacgggttccccctagtccccgagcttccccct
accccagaccccctctcatccagcagccccaccggtgacatcccggaggagccgactgag
agcgagcaacaggaggtgctgtctctttgcatctcccacatccaggatgaggaggacagg
cagtgggaggaggtggagagggggggagaggaggagcggggtggtctgtgtgaggaggcg
gaggaggcggaccaggcctgctccatgcaatatgatgaggaggagattgaacagctcaac
atgatggtgcaccgcgtgggggacgagatgttcacgctgctgtcccctcccagccagggc
cagtccccagcccaccgccccaacagagggggctctatcggtggctctagcaccgaggcc
tcccccatccgggtgctggtgggccagggcaggacaggtctctaccacgaagaggaggac
agagtcttcttcatggaggacctggatgcaggaggggaccttgtgaccagcagtcgtcta
acctcgccttctaacctcgcccctcagccctcttctcctcagcccagcaggtctggcccc
cttaccgactcatccaggaatggatggcccactgaagcccagtcagatctgtcccagcag
ccccacagccatccctcacagtgccccagcaccaagcgacccagtcccagccctggccgg
gagcccctgccctacactaacggctgggaggtgggcctggagggggcagaaactgctgag
gtcatcgcacaccgcatgggagggatgaagctatcggccaccgtcattttcaacccccac
tcccccagcctgactgagatggctgtggacaagctgctcttgccccgacccctctcctcc
tcagagacagagccatgcgcccccctggtggccacaaactgcctgctcaactcctgtgtc
tgctgcggcagctgtgaggtcggccatgatgacacgctcaccatggacaccacagggctg
ggaatgggcctggggttggaccaacactgcaagccccacagctctgtcatccagtcctct
gcctgccgcctagcttcctcaggacacgacctacatgggaaaggtgactctcccccctct
cgctgctcctcagagccagctccaggggtggaggaaggggaccagcactgtgaccagtgc
ctggtggtggtggccccggcgcctcagcagtgcctgggccagaacaggagccccattggg
gtaaggggaaccccagaaccttgttcccaccagtgcaggacagtgaggaggcctcaggcc
agcgggggaagggacaggacggggaccagagaggcagacagtgagtccaaggaagagatc
aagaagaacactagtttttttcaggactctcctctcagctcagtctccagtagtgactgt
gagagtgtgtctgtcaccacatgtagtctgtccagcagtgcttacacagccagccctgtc
agcagtctgaccacgagctcggggacgtcagaggatctggaccgtcatgaaatccagctg
gccctgcaggctgctaagatggccgccaggaacaagatccgctcgcgcttccacagcagc
agtgacctcatccaccgcctcttcgtctgcatatcgggtgttgctgaccagctgcagaca
aactatgccgccgaccttcgaagcattctgaagacactgtttgaagtcatggctacctct
gagcagggggacaatgacaaggagaaggcatgtccagggcttcgcagtgctgtgctggag
gactgttttctctgtcaggagaccatctcctcctcggagctggcagccaaggccctggat
ggacagtttgaagatcccccagactgggttcctgatgaggaatgtgactcctgcatcacc
tgtaaggcccccttcaccgtcattcgcagaaagcaccactgtaggagctgtggcaagatt
ttctgctctcgctgctcctcccactcagccccgttaccgcggtacggccaggtgaaggcc
gtcagggtgtgtacgcactgctacatgttccacgtcacaccgttctacagtgacaagact
ggcatctga
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