Oncorhynchus nerka (sockeye salmon): 115146214
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Entry
115146214 CDS
T07952
Name
(RefSeq) parapinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
one04030
]
115146214
G protein-coupled receptors [BR:
one04030
]
Rhodopsin family
Vision
Opsin
115146214
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srsx
7TM_GPCR_Srv
7tm_4
Motif
Other DBs
NCBI-GeneID:
115146214
NCBI-ProteinID:
XP_029544017
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All DBs
Position
LG2:52871919..52879558
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AA seq
343 aa
AA seq
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MMQLPASLLNASSYLGPSPEGKELLPRAGFITLSIVMAMFTVPAIVLNSTVIVVSLMNKQ
LRQPLNYALVNMAVADLGTALTGGVLSVVNNALGYFSLGRTGCIIEGFSVALFGITSLCT
VALIAIERMFVVSKPLGPISFQTKHAVGGVALSWVWSLLWNTPPLFGWGRYELEGVGTSC
APDWHNRDPNNVSYILCYFLLCFAVPFLIIVASYSKLIYTLRQVSAMGCIEGGAAAKAEA
KVARMVVLMVVTFLVSWLPYATLALVVVSHPDAPISPLLGTVPVYLAKSSTVYNPLIYLY
MNKQFRRYAVPFLLCGRDPWPSEEEGSEMQTTVATINNKVSPS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagctgccagcctctctcctcaatgcttcgtcctacctgggaccgtcccccgag
ggcaaggagctcctgccccgagccggcttcatcaccctctccatcgtcatggctatgttc
accgtaccggccattgtgttgaactccacggtgatcgtggtgtcgctgatgaacaagcag
ctgaggcaacctctgaactacgccctggtcaacatggccgtagctgacctggggacagcg
ctgactggtggggttctgtctgtggtcaacaacgctctggggtacttctccctgggacgg
accggctgtatcatagagggattctctgtggctctgtttggtatcacgtcactgtgcacg
gtagctctgattgccatagagaggatgtttgtggtgagcaagccgctaggaccaatctcg
ttccagaccaagcatgcggttgggggtgtggccttgtcatgggtttggtctctcctctgg
aacaccccgcccctattcggctggggaaggtacgagctggagggcgtggggacttcgtgc
gccccggactggcacaaccgggaccccaataatgtgtcatatatcctgtgctacttcctg
ctgtgtttcgccgtgcccttcctcatcatcgtggcctcttactctaaactaatttacacc
ttaagacaggtctctgcaatgggctgtatagaagggggtgcagcagccaaggcggaggct
aaggtggcccgcatggtggttctgatggtggttactttcctggtcagctggctgccctac
gctaccctggccctcgtggtggtctcccaccctgatgcccccatcagccccctgctgggc
actgtgccagtctacctggccaagagcagcacagtgtacaaccctctcatctacctctac
atgaacaaacagttccggagatatgcagtgccattcctgctgtgtgggagggacccatgg
ccatctgaggaggaggggtcagagatgcagaccactgtggcaaccatcaacaacaaagtc
tcccccagttga
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