Oncorhynchus nerka (sockeye salmon): 115146229
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Entry
115146229 CDS
T07952
Symbol
ttll5
Name
(RefSeq) tubulin polyglutamylase TTLL5 isoform X1
KO
K16602
tubulin polyglutamylase TTLL5 [EC:
6.3.2.61
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115146229 (ttll5)
04812 Cytoskeleton proteins [BR:
one04812
]
115146229 (ttll5)
Enzymes [BR:
one01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.61 tubulin-glutamate ligase
115146229 (ttll5)
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
115146229 (ttll5)
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
115146229 (ttll5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
2Fe-2S_thioredx
Motif
Other DBs
NCBI-GeneID:
115146229
NCBI-ProteinID:
XP_029544037
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Position
LG18:30870603..30969492
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AA seq
1334 aa
AA seq
DB search
MPTVIRDKEDSESSEDEQEDHPCIAWSGLSRKIPVLVFFAEAIVSKDGNIRSVGERYNLA
FKIVRTESRLVRGLLTTHGFHEIHPNSNDFNLMWTGSHLKPYLLRSLQDFQKVNHFPRSY
ELTRKDRLYKNIQRMQQSHGFKNFHIVPQTFVLPSEYQEFCSSFVKDQGPWIIKPVASSR
GRGIYLVSNPTQIPMDENILVSRYINNPLLIDDFKFDVRLYVLVTSYDPLTIYLYEEGLA
RFATVKYDCGTKNIKNQFMHLTNYSVNKKSSDYVSCDDPEVEDYGNKWSMSAMLRYLKQE
GKDTTLLMSQVEDLVIKAVLSAELQIATACKMFVPHRNNCFELYGFDVLIDSNLKPWLLE
VNLSPSLACDAPLDLKIKASMISDMFSIVGFVCQDPLLRQPRSERVALDPGLKYPAPKAQ
RPLSAQSTIAPSKVRQRPLSANNTDTDGPKEKPGSKQGDSTLGLTAEELKVLRRIREEHE
RRGGFIRIFPTPETWELYSGYLEYKTSMNSMLANRLFQGRLGKAVVTSRSRKLNGNVQLQ
VDVFHACHVIQYERKLLSLEARRRRLRHLAEHSAMGRKRAARGRKASPTGTSDEEDVEEG
EERVQEEEEKDKKALGSLVVQTDSVPTSLKRFHNEALSSAEPARCTTAITKPKVNLLHIL
QQGWDLSKVQARMAFSSYLLRVQMRLLAESRTIANSAWPEKDNEQMELVIRFLKRAASNL
QQDMRMVLPSRQLPLQDRRRILSHQLGEFIHCYNKETEHMVKKVEKIKDQEHCINPSVFQ
EFIAEASESDLEEVLTFYTHKNKSASVFLGTKCRSTKLDNCNSLGSREPATPENQKTLPM
AKESSSASESSTSEVRNSTDQASVVQPTADQPTGEQPAAALRSSKQPEVQASQHSSSFPA
ALDCGHIHLQHYSHPQNPPQSLPLHCPPPPPPSQPPSYDQSHLRLHSPRQPETPPQPQAS
VFSSTSTLVPQPPRVIWAAARSGPTTVSAPPVSQVLRQVQSFTSTSSAAAASSSMPGAIH
IYSQKISRPTSAGQAIRRTPSSRPRPDPNGVFNKDLDSLPAQAQSNQQAIVSALQKLAEK
QAARQYNSSSHISLLTQHLTNLNLTNRVLSRGAITLTPAVRHGHGTGAVTQRPVRAVHSD
TGPIHSTTGPRAPRDEEGLWDGETQSAYNLVRGVGPQQRYQPIPGSYQLQFAIQQLQQQK
FQSRQLLDQSRTRHQAMLAAKAMMPPYPVMAPWPQAPTGPSSSSLPVTHPGRQNHSHACT
GPGHILNPKPPSSAREGLVRKTATQRLSKQTSSERPANGALTSNSQHVVYEAVCGKAGLS
GYSKLFQGQGSKLR
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgccaactgtgatccgggataaagaggattcagagtcctcagaggacgagcaagaggac
catccttgcattgcctggagtggcctcagcaggaagatcccagtcctggtgttctttgct
gaagccatcgtctctaaagatggaaacatccgttctgttggagaacggtataacctggcc
ttcaaaattgtgcgcacggagagccggctggttcgtggcttactgaccactcatggattc
catgagatccatccaaacagtaatgacttcaacctcatgtggacggggtctcacctcaag
ccttacctcctacgcagccttcaagacttccagaaggtcaaccactttcccaggtcatat
gaactgacgcgcaaagatcggctgtataaaaacatccagcggatgcagcagtctcacggc
tttaaaaacttccacatcgtccctcagacctttgtgcttccctcagagtaccaggagttc
tgtagttctttcgtcaaggaccagggcccctggatcattaagccagtagcatcttcaaga
ggacgagggatctacctggtcagcaatcctacccagattccaatggatgagaacatctta
gtttctcgctacatcaataacccattactgattgacgacttcaagtttgatgtgcggttg
tatgtgctggtgacatcatatgatccactcactatctatctctatgaggagggcctggcc
aggtttgccaccgtgaagtatgactgtggcacaaagaacatcaagaaccagttcatgcat
ctcaccaactacagcgtgaacaagaagagcagcgactatgtcagttgtgatgaccctgaa
gtggaggattatgggaacaaatggagcatgagtgcaatgctgcggtatttgaagcaggag
ggaaaagacaccacattgctgatgagtcaggtggaggacctggtgattaaggctgtgttg
agcgctgagctgcagatagccactgcctgcaagatgtttgtgccccacaggaacaactgc
ttcgaactgtatggctttgatgtgctcatcgactccaacctcaaaccatggctcctggag
gtcaacctttctccctccctggcctgtgatgctcctctggatctgaagataaaggccagc
atgatatcagacatgttttctattgtgggctttgtttgtcaggaccccctgctacgacaa
ccccgctctgaacgggtggctctggacccgggcctgaagtacccagcccccaaagcacag
cgtcctttatctgctcagtccaccattgcaccctccaaagtgcggcagagacccctgtca
gccaacaacactgacacagacgggcctaaggagaagccaggaagtaaacagggggacagc
accctgggcctgactgctgaggagttgaaagtcctgaggaggataagagaggagcacgag
agacgaggggggttcatccgaatcttccccaccccagagacatgggaactgtatagtggt
tatctggagtataagacatcgatgaactccatgttggctaacagacttttccagggaaga
ttggggaaagcggtggtgacctcaagatcacggaagctgaatggtaatgtgcagctgcag
gtggatgtgttccacgcgtgtcacgtgatccagtacgagaggaagctgttgtcgctggag
gcgcggaggcggaggctgcgccacctggcagagcactccgccatggggaggaaaagagca
gcgaggggtcgcaaggcctcccctactgggaccagtgacgaggaggatgttgaagagggg
gaggagagagttcaggaggaagaggagaaggataagaaagccctgggttcgttagtggtg
cagactgacagtgtgcccacctcactgaagcggttccacaatgaggccctgtcctcagca
gaaccggcccgatgcaccactgccattaccaaacccaaagtcaacctgctccacatcctc
cagcagggctgggacctcagtaaggtccaggctcggatggccttctcctcctatctcctt
cgggtgcagatgaggctactcgcagagagcaggactatcgctaactccgcctggccagag
aaggacaatgagcaaatggagctggtgatccgcttcctgaagcgtgcggccagtaacctt
cagcaggacatgaggatggtcctgcccagtcgccagctccccctccaggatcgccgacgc
atcctgtcccaccagctaggagagttcatccactgctacaacaaggagacagagcatatg
gtgaagaaggtggagaagatcaaagaccaggaacattgtatcaaccccagtgtgtttcag
gagtttattgctgaggcaagtgaaagtgatctggaggaggtcctgacattctacacacat
aaaaacaaatcagccagtgtctttttgggaaccaaatgtcggagcactaaacttgacaat
tgcaacagcctaggttcaagagagccagctaccccagagaaccagaaaactttgcccatg
gcaaaagagagctccagcgcctctgagtcctcaacgtctgaagtcagaaacagcacagac
caggccagtgtagtccaacccactgctgaccaacccaccggagagcaaccggctgcagcc
ctcagaagtagtaaacagcccgaggtccaggcctcccagcactcctccagctttccagct
gccttagactgtggccacatccacctgcagcactactctcacccccagaacccaccccag
tctcttcccctgcactgccccccaccaccgcccccatctcagcccccatcctacgaccag
tcccaccttcgcctccactccccacgccagccagaaacccctccacagccccaggcctct
gtgttctcctcaacctcgacccttgtcccccagccgcctcgggtaatatgggcagctgcc
cgctctggtcccaccacagtctcagcaccaccagtctcccaggtcctaaggcaggtccag
tcctttacctccacctcctctgcggctgcagcctcatcctccatgcctggtgccatccac
atctacagccagaagatctccaggcccacctctgcaggtcaagcaatcagaaggacgccc
tccagccggcccagaccagatccaaatggggtctttaataaggacctggactcactgcct
gctcaggcgcagtccaaccaacaagccatagtctcagccctgcagaaactggcagagaag
caggctgcccgccagtacaacagctccagccacatcagtctcctaacacaacacttgacc
aacctgaacctgactaacagggtgctgagcagaggggccatcaccctgaccccagcagtg
cggcatggtcatgggactggagctgtgacccagcggcctgtcagggctgtccactctgac
acagggcccatccacagcactactggccccagggcgccgagagatgaggagggtctttgg
gatggggagacccagagtgcctacaacctggtgagaggcgtcggcccccagcagcgctac
cagcccatcccaggcagctaccagctccagttcgccatccagcagctgcagcagcagaag
ttccagtcccgccaactgcttgaccagagtcgcacccgccaccaggccatgttggctgct
aaggccatgatgccaccctatcctgtgatggctccttggccccaggctcccaccggccca
tcctcctccagtctaccagtgacccacccaggccgccagaaccacagccatgcctgcaca
ggcccaggacacatcctcaaccccaaaccacccagcagtgccagggagggcctggtcagg
aagacagccacccagcgcctcagcaaacagacctcatcagaacgcccagccaatggagct
ctgacgtccaactcgcagcatgtggtctacgaggccgtgtgtgggaaagcaggtctttct
gggtacagcaaactgtttcagggacaggggtccaagctcagatga
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integrated database retrieval system
