Oncorhynchus nerka (sockeye salmon): 115146301
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Entry
115146301 CDS
T07952
Name
(RefSeq) pre-mRNA-splicing factor syf2 isoform X1
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115146301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115146301
Spliceosome [BR:
one03041
]
Complex B
Other components
Prp19-related factors
115146301
Complex C
115146301
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
115146301
NCBI-ProteinID:
XP_029544158
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All DBs
Position
LG18:complement(34069623..34076154)
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AA seq
239 aa
AA seq
DB search
MISFNNEKVSASVSDEQTESAASQKREERLRKFRELHFKRNEARNLNHKEVVEEDKRLKL
PTNWEAKKARLEWELMTDEKKKECAAKGEDYDRVKLLEISAEDAERWERKKKKKNPDPGF
SGYAEAQLRQYQRLTKQIKPDMDGYERQREQCGEDFHPTSNSLIHGTHVPSKEGIDRMVE
DVEKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgatatccttcaataatgaaaaggtatctgcgtcggtcagtgatgaacagaccgaaagt
gctgcatctcagaaaagagaggagagactgcgaaaattccgggaactgcatttcaaaagg
aatgaagcacgcaatctcaatcacaaggaggttgtggaggaggacaaaagactgaaacta
ccaactaactgggaggcaaagaaagcccgtctggagtgggaactaatgactgatgaaaag
aaaaaggagtgtgcggccaaaggggaggactatgaccgggtgaaactgctagagatcagt
gctgaggatgctgagcggtgggagagaaagaagaagaagaagaaccctgacccaggattc
tcaggttacgcggaggcccagctgcgacagtaccagcgcctcaccaaacagatcaaacca
gacatggacggctatgagaggcagcgagagcagtgtggtgaggacttccaccccacatcc
aacagcctgatccatgggacccacgtcccatccaaggagggcattgaccgcatggtggag
gatgtggagaaacagattgagaagcgggccaaatacagccggcgcagggcctataacgat
gacgcagacatcgactacatcaatgagaggaacgccaagttcaacaagaaggcagagcgg
ttctatggcaaatacacagccgagatcaagcagaatctggagagaggcacagctgtctaa
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