Oncorhynchus nerka (sockeye salmon): 115146340
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Entry
115146340 CDS
T07952
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115146340
03036 Chromosome and associated proteins [BR:
one03036
]
115146340
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115146340
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
115146340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
CFAP43_N
AAA_30
Motif
Other DBs
NCBI-GeneID:
115146340
NCBI-ProteinID:
XP_029544223
LinkDB
All DBs
Position
LG18:complement(35907115..35983828)
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AA seq
1471 aa
AA seq
DB search
MPRETATSMDIVEDFPPPPPEMLADEVPYADEEEGEQFVFDDSGDEFPEADRPPHAPPAP
DYGGKAQINGVAPHPQQEGPDPRPSNPEPTAAAAADTDTVAAEPPVPVAMATTDTVASAP
DPPVANAPTETTAPVAAAEGDKTSSVPAGADRDLPPPPPPEDSTPVGTDSVNTNKEVSSD
DPPPAVPRTTSQRKVNPYSVIEITPLQLQQLEQQHGPVPTSSSPVERVGGEGEREGKGQD
VPPASPLCVPPGYSVPVPCGYATPSGVPLITPAYTTPVIIRHFSVDEEDTVVGTGNISVD
IEEYPAIREEDALSKWVSDPANTAWMENPDEVIYDDVPRENSDSTTEPDEMIYDDVEFGE
EGCGSSLDNGWSSSEFESYDEQSDGEGQGENGLPDAFMRGKPPQRKTHLSQDLTRLKEHY
EKKMKDLMANTVGTVELQQIKQKHEQKMQKLVKAARDGTKDGLEKTKAAVRRGRSYIKTH
CHERKSTCFEDEESELFIEVECFNMEPVLSPVPEGLSQQQVVRRCILGSILESEKNYLDA
LKRILEQYEKPLLEIEPRLLSDRKLKVTFYRIREILQCHALFQIALACRVAEWDSLEMIG
DVFVASFSKSMVLDAYCEYVNNFSTAMAVVRKTCASKPSFLDFLKQRQDTSSDRVTLYGL
MMKPIQRFPQFILLLQDMLKNTPAGHSDRLPLQMALTELETLAEKLNEKKREADQRCEIR
HIAKAMNERYLNKLLSNGSRYLIRSDDIVETVYNDHGEVIKTKERRLFLLNDVLMCATPN
VRCSVDGSGSGNAALGQKFLLKWSVPLSFVDVVEFGSSEDMGDNSRFTPQPHSGEKVIIN
AKPNKLYMGPGQLYQDLQNLIHDLSLVNQISSMIGSLKGNYQNVNPAVAHDWVSGLQRLI
LKKEEEIRAADRCRIQLQLPGKPDKSGRPTYFSAVFNTFSPAIKQSWISNLQMAKLALEE
DNLQGWFFAEDDGNQIKKPKHPLLLRQMPVVMSKLQEFKVECAVHNPEPHINIESTADTP
ALGHGCVWVASCTNQMGQIAIVAMQNSSPKVTECFNVESRILCMAYVPMEQRTQENGEGN
PENNHSSAGKTSDAPTVCLGMEEGSIIVYKSSQRSKKVRLQHFFTPDKSTVTSLVHKKQC
LYTGLVNGSVTIYSRAQDGSWNPDSPKVLKLGVLPVKAMLAVEEHVWASSGGQVFIISTT
THTVERQVEAHQEEGMVVSHMVVAGVGIWIAFSSGSTLRLFHTETLEDLQDINIATPVHN
ILAGNQRVSVSSLLVCHGLLLVGTNLGVTVALSVPRLQGIPKVTGRGMVSFHAHHGPVKF
LTMAAAVCNRPSGSPGHSLPSQPGGTKDGEKAQASSPPTPGSTPTQGRGVWLGEAGCTSM
ALQDSLSSSCGSLALSQGSLEHGLEDGAIYDLVNDPAHHQRGRRVQKVDVSSLLVVSGGL
GHHRVNRKTKQSRQEETVSNIMVWQIPLLNM
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgcccagagaaacggcaaccagtatggacattgtggaagacttccctcccccgcctcct
gaaatgttggcggacgaggtgccctatgccgatgaagaagagggggagcagtttgtgttt
gatgacagtggggatgagtttcctgaggcagaccggccaccccatgcccctccagcccca
gactacgggggcaaggcccagatcaatggtgtggcacctcacccacagcaggaaggacca
gacccccggccctccaacccggagcccacagcagcagcagcagcggacacagacacagtg
gcagctgaaccaccagttccagtagccatggctacaacagacacagtggcatcagcaccg
gatcctccggtagccaatgctccaacagaaacaacagctccagtggcagcagcagaaggg
gacaagacttcatctgtcccagctggtgcagaccgtgacttaccccctcctccaccccca
gaggactccactcctgtaggaacagactccgtgaacacaaataaggaagtgtccagtgat
gaccctcccccggccgtccccaggaccacctcccagaggaaagtcaacccctactctgtg
attgaaatcacccccctccaactacagcaactggagcagcagcatgggcccgtccctacc
tcatcctcaccggttgagagagtaggaggagagggggagagggaggggaagggccaggat
gttccccccgccagccccctctgtgtcccaccgggctactctgtgcccgtgccctgtggg
tatgccaccccctctggtgtgcccctcattacgccagcctacaccacgcccgtcatcatc
cgacacttctcagtggacgaggaggatactgtggtggggacaggcaacatttctgttgat
attgaagagtatcctgccatcagagaggaggatgctttgtctaaatgggtgtcggaccct
gcaaacacagcctggatggaaaatccagatgaagtcatttatgatgacgtgcccagagag
aactctgactccactacagagccagacgagatgatctatgatgatgtggagtttggggag
gagggctgtggcagctccctggacaacggttggagttccagcgagtttgagagctatgac
gagcagagtgacggagagggccaaggggagaacggcctgcctgacgccttcatgagaggg
aagcccccacaaaggaagacccatctttctcaagatctgacacgcttgaaagaacactat
gagaaaaagatgaaagatcttatggcaaatacagtgggaacagtagagctgcagcagata
aaacagaaacacgagcagaagatgcaaaagctggtgaaggcagcgagagatgggaccaaa
gacggcctggagaaaaccaaagcagcagtgagaaggggaaggtcgtatatcaagacccac
tgtcacgagaggaagtcaacctgttttgaggatgaggagtcggagctcttcatcgaggtg
gaatgcttcaacatggagccagtgctcagtcccgtccctgaggggctctcacaacaacag
gtggtgaggaggtgtatactgggctccatattagagagtgagaagaactatctcgatgca
ctgaagcggattttagagcaatatgaaaagccacttttggagattgagcccaggttgcta
agcgataggaagctgaaggtgacattctatcgtatccgggagattctccagtgccacgcc
ctgttccagatcgccctggcgtgccgcgtggccgagtgggacagtctggagatgatcggg
gacgtctttgtagcctcgttctccaagtccatggtgctggatgcctactgtgagtatgtg
aacaacttcagcacagccatggcggtggtcaggaagacgtgtgcctccaaacccagcttc
ctagacttcctcaagcaacgtcaggacaccagcagtgaccgggtcactctctatggactc
atgatgaagcccatccagagattccctcagttcattctactgctgcaggacatgttgaag
aacacaccagcaggccacagtgacagactgcccctacagatggccctgacagaactggag
accctggctgaaaagctcaatgagaagaagcgggaggctgaccagcgctgtgagatcaga
cacatagccaaggccatgaacgaacgctacctcaacaagcttctgagtaatggcagccgc
tacctgattcgctctgatgacatagtggagacggtctacaacgaccacggagaggtgatc
aagaccaaggagcgacgccttttcctgctcaacgacgtgctcatgtgtgccacgcccaac
gtccggtgcagtgtggatggcagtggtagtggcaacgccgccctgggtcagaagttcctg
ctgaagtggagtgtccctctgagctttgtggacgtagtagagtttggctccagtgaagac
atgggtgacaacagccgcttcaccccacaaccccactctggagagaaggtgatcatcaat
gccaaaccaaataagctgtacatgggtccaggccagctgtaccaggacctgcagaacctc
atccacgacctcagcctggtcaaccagatctccagcatgatcggaagcctcaagggaaac
taccagaacgttaaccctgcggtggcccatgattgggtgtcaggtctgcagcgtctcatc
ctgaagaaggaggaagagatccgggctgcagaccgctgtaggatccagctgcagctgcct
ggcaaaccggacaaatctggcaggcccacatacttcagtgcagtgttcaatacgttctct
cctgccatcaaacagtcatggatcagtaacctgcagatggccaagcttgctctggaggag
gacaacctgcagggctggttctttgcagaggatgatggtaaccagatcaagaagccgaaa
catcctctcctgctcaggcagatgcctgtggtcatgtccaaactacaggagttcaaggtg
gagtgtgcggtccataaccctgagccccacatcaacatagagagcacagcagacacccct
gctctgggacacggctgtgtgtgggtggcgagctgcaccaatcagatgggtcagatagcc
atcgtagccatgcaaaactccagccccaaagtgacagagtgcttcaatgttgagtcacgg
atcctgtgtatggcgtacgtacccatggagcagaggacccaggagaacggggaggggaac
cccgaaaataatcactcctcagcagggaagaccagtgatgcccccacagtctgtctgggc
atggaggagggcagcatcatagtctataagagcagccagagatccaagaaggtccgtcta
caacacttcttcaccccagacaagtctaccgtgaccagcctggtacacaagaagcagtgt
ttatacactggcctagtgaacggctcagtcaccatctactccagagcacaagatggctcg
tggaatccagactctcctaaggtgctgaagctgggggttctgccagtgaaggccatgcta
gctgtggaggaacatgtctgggcttcctctggaggacaagtcttcatcatcagcactacc
acacacactgtggagaggcaggtggaggcccaccaggaggagggcatggtggtatcccac
atggtggtggctggggtgggtatctggatagccttcagctctgggtccaccctcagactg
ttccacacggagacactggaggatctacaggacatcaacatcgctacacctgtacacaac
atactggctgggaaccagagggtctcagtcagcagtctactggtgtgccatggtctgctg
ctggtggggaccaacctgggggtgacagtggccctctctgtccccagactacagggaatc
cccaaggtcacaggacggggcatggtatccttccacgcccaccatggcccagtaaagttc
ctcaccatggcagccgcagtgtgcaaccggccctctggcagcccaggccacagcctacct
agccagccaggaggcaccaaggacggggagaaggcccaggcctcctcacctccaacccca
ggctccacacccacccagggccggggagtgtggctgggggaggcaggctgcacttccatg
gccctccaggactccctgtcctcctcctgtggctccctggctctgtcccagggctctctg
gagcacgggctcgaggacggggccatctatgacctggtcaatgatccggcccaccatcag
aggggcaggagggtccagaaggtggacgtcagctctctgctggtggtttcaggggggctg
ggtcaccacagggtcaacaggaagaccaaacagtcccgtcaggaggagacggtgtccaac
atcatggtgtggcagatccctctactcaacatgtga
DBGET
integrated database retrieval system
