Oncorhynchus nerka (sockeye salmon): 115146347
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Entry
115146347 CDS
T07952
Name
(RefSeq) beta/gamma crystallin domain-containing protein 1-like isoform X1
KO
K25509
beta/gamma crystallin domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115146347
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
115146347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crystall
Ricin_B_lectin
RicinB_lectin_2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
115146347
NCBI-ProteinID:
XP_029544234
LinkDB
All DBs
Position
LG18:37115473..37179046
Genome browser
AA seq
2667 aa
AA seq
DB search
MSKSGTLKIKNLFHKTKSLDKENKDGEKHTFKDATSYGDGEFASPGPSLPSSPELVSPVS
PLDGTLHRSQASEKKKKKKRFLSLQLKKKGSKEEGRIDDPLSYNGADELHSFSSNMSFDQ
LSVKTEYSTTTDRDATSMISYDMSAFSPNKSRNKSSDRVLNRIGSFFSIKKKKSRSGSLS
ADSEDGSWLGPGSPGSPQSPGSPVSPQSPGSPVSPQSPGSPLSPHQPPQEDWQRTPTTTR
REGEVVEAGAGPVQGSLSELQEEGSVFSTSSSPGTSSLASLVVVDRGDLLFAGSDSSGRG
SVREVQVCRVSRAEADGESDRNSWNLTPTNSSSSGADQVPGLSPTEDIVGEASRRLQVHL
EQTTVKDREGSGGGSPVVQNTLRSFELSQSHLKADFTSLVTESKKTSLKTSVGGKGSYLV
GVTVGSQSHTPSSSDPQPEGEEGKDSPAMGKKNRRRALKSTSSSSTETAPPTQTTLHGGE
EGATQDSPVKLHKALWVETHLGEEEGERKGKRKSVNSHSVLAIPMTVAPVEYPDTAGVLA
IPMTVAPVEYPDTAGVLATLTPSAVSVADASGREPKPKLSVSTAPASKESKTTNKAQPEA
NSPGTDSESSTPLEYQMALSKEEKCRSVKLSRSEKLFPKKVYVSPEHSFDGDEQTKTELE
NNDIADLASKIPQKSEVKLSPSPQKVYVDLKEPNNDCIITAGEITKGTDSDRRQHDPMAV
DSSPTSPTPELDEASPTTTMPGRKTQPNTGGSRVRCQGTTQNTPSKPGDKVGNVASRSKC
PPPPVGPKSKAVLGMAKGKGLKDGGKAGISSGAPSQRTPNDGSEKTKVMSPTLKDQPTAG
KTEVTDSPKSKIPKKSQTEAVSKPPLSPGTTSVVDVSVAVFLPVLGSKPQKTPKPKHLMI
KTDKKPITEEVNEVGSGGKPTPGPVTPEEASPTKVPVMSPVNSDKVNLSNGMEKDPEDNN
TDIAKTSEPKDVKKQAPTRPDSTNSSMIPKSRLPKAPNSLSLVRKMKDGKLQTIDTGSKT
TKTTERASVVNSRPSTPTSPKQQELPSPEEMPPDETMTTEPEKGSKLPCPLQTNLPQQAS
NKSTPRVDGDTPTPPSLLPTKPEKPASLGLKKKSNITSPTMDMTADDSGKTSPLSLKSPV
KDPSDSVTVASKRAMFRQVTPPKGKPSKPLKKYEQTMNSETQSKSIQDHVSLVTDDSQID
DQQTTPATHQQLFVNDQTDEPAVTGTNKSLEDRSSSSTPETKMDKISENGQKKSISVKTT
CITKEQQTKPYADLSSETESDHNYVEALTNTPLQQMGPVSPGVVLEKRPTEPSLIVSASS
TPTHEEVIYTSTKPELTDHIHTDTEDQANQKSDEYNENTSTASEKLILSAGEGISNTNQP
VEHGLDVAKDSSPKNASTVVERRESQDTATQSPIFGSEEKSKKLANAQTPDIVPIRNGIV
SDISIVSGKETEVQKGGEPVKVSDIITEPAIVLKPIKNGEVQLNKELPSLTQNLADAHSG
PHKENKEDKLGEAATKSTVTKMDAKQESKTITTKDQKEKVTKQEERPSEGATKILDTKQD
SKSIRTKAQEKVLLLKEPPKTTKANPKAELPLQLPTPLKLPSPSKPLPLKQESPSSWLNV
ERGSKQEQKRETKRRLDCSASEDESLAEIDNVDDFIRSIKELGTPFPLPPKRHHDHAKTS
SPPFALPAIKEDRFEKPFDADGFQFGLKKRTKDEETPAMLIKKQAREEKTQPRRANAEDS
LLFKALQSPSRARRKPGCQTDGKDGEVNIKVEGKREVEKKEEQGEETGQLTSRLGRMSLL
SNLLSSPRTSRRNKGDPSSSVSNGAPPSPTTQGTVPERAGWRSMNPGLSMGVVATGESII
SPSSPTPLPLFTELKLPDPLEQYLRTDKGSSQSSATQSTMASPVMGLGHGTGLKGLTLGL
HPATNHIPQAPLNGLPAANPKIPEVRGFHKRPGKIVLHEQAQFEGEAYEVFGDVEDASMM
KLSPVISVRVIRGCWLLYEKPRFQGRTIALEEGPMELVNVWAEEVTPGALDHMGLPVPTS
PMVIGSIRLAVRDYSLPRIDLFTEVNGLGRMTSFCDDTIEICSYGNIQNTGSIKVHSGVW
LVYGDPGFGGLLSVLEAGEYPCPEAWAFPQPFIGSLKTLKMGGIKVEHPNEVKALVYERP
CFEGECVEIDDDVYDFREGGEKKEGRVEEVVEEEAEGNPVRRKTLCSVGSIKIIRGLWVG
YDEPEFEGHQYLLEEGEYPDWREWGGYGDQLLSLRPVRTDVLSPHVKLFSERDFGERGVN
MDLLGPVINMEDTGFGSKTQSINVQGGVWVAFENPGFSGELYILEKGLYGSPEDWGGPNL
KISSLQPVFQDNLGGSSKFRLQLFSKPGFQGRVVVLEDSVVALEEDFFPGSCRVLAGSWV
AYEGSQFTEHMYVLEEGDYPNTKSMGCLGPDSTIRSIQTISHEFSLPSITLFSKVGCRGR
RVVLTEGVVNLQLAGVDGRIRSLVIDGGMWVLYEGCHHRGRQILLPPSKLGDWCKFSSWP
RIGSLRPLLQKQVYFRLRSRETGYVMSLSGPLDDIKLLRVQALEETGGVDQVWLFHDGVL
RCKLVEDCCLQITGSVVMAGSRLSVSPPEPGKDNQLWNITPDGLVRCHLKPDLVLEVKGG
QSYDKTQVILNTFDERKHNQRWSLEIL
NT seq
8004 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatctggaacattaaaaattaagaatttgtttcataaaacaaagtcactggat
aaagaaaacaaggacggggaaaagcacacatttaaagatgcaacttcatatggagatggg
gagtttgcgagcccaggcccgagtttaccgtcgagtcccgaacttgtcagtcccgtcagc
cccctggatgggacgctgcataggagtcaagcaagtgagaagaaaaagaagaagaagcgg
ttcttgtccttgcagctcaagaagaaaggctcaaaggaggaagggcgcatcgacgaccca
ctgtcctataacggtgctgacgagctccacagcttcagcagtaacatgagttttgaccaa
ctgagcgtgaaaacagaatacagcaccacgactgacagggatgctacttccatgatcagc
tatgacatgtcagccttcagtcccaacaagtccagaaataagagctcagacagagtgttg
aaccgcatcggcagttttttttccataaagaagaagaagagccggagcggttcactctca
gcagactcagaggatggatcctggcttggtcctggctctccaggctccccccagtcccct
ggttctcctgtctccccccagtcccctggttctcccgtctcccctcagtcccctggttct
cctctctccccccaccaacctccacaggaagactggcaaaggacccccaccaccacccgg
agagagggggaggtagtggaagccggagctgggccagtgcaaggaagtttgtcagagctc
caggaggagggatcggtgttcagtaccagctccagccctggtacctccagcctagcctct
ctggtggtggtggacagaggggaccttttgtttgcaggcagcgacagcagcggtcgtggc
agcgtgagggaggtgcaggtgtgcagggtgagccgggccgaggcagacggagagtccgac
aggaattcttggaatctgactcccacgaactcgtcctcctccggagcagaccaagtccca
gggctcagccccactgaggacatagtgggagaggcgagcaggaggctgcaggtacatctg
gaacaaaccactgtgaaagacagagaggggtctggagggggcagcccagtggtccaaaac
accctcaggtcgtttgagctctcccaatctcaccttaaggctgacttcacctctttggtc
acagagtctaaaaagacctccctgaaaacatctgttggagggaaggggagttacctggtg
ggagtgactgtaggctctcagtcacacaccccgtcctcctcagatccccaaccagagggg
gaggaggggaaggacagcccagccatggggaagaaaaacaggaggagggctctgaaatcc
accagcagcagctcgactgaaacagctccccccacacagaccacgttacatgggggagag
gagggggcgacgcaggactcaccagtgaagctacacaaagccttgtgggtggaaacacac
ctgggagaagaggagggggagaggaaggggaagaggaagagtgtaaattcgcattcagtc
ctggccatacctatgactgtggcccctgtggagtaccctgatactgcaggtgtcctggcc
atacctatgactgtggcccctgtggagtaccctgatactgcaggtgtcctggccactcta
actccttcagcagtatcagtagcagatgccagtggcagagagccaaagccaaagctgtct
gtatctacagcgccagcctccaaggagtccaaaacaacaaacaaagcccagccagaggcg
aacagtccaggcacagactcagagagcagcacccctctagagtaccagatggccctgagc
aaagaggaaaagtgcaggagtgtgaaactgtcccgcagtgagaagcttttccctaagaag
gtgtatgtgagccctgagcacagttttgacggggacgagcagacaaaaacagagctagaa
aataatgacatcgcagacttggcttcaaagattcctcagaagtcagaggtgaaactctcg
ccaagcccccaaaaagtttatgtagacctcaaggaaccaaacaatgactgtatcatcact
gctggggagataaccaagggtacagactctgatcgaagacaacatgaccccatggctgta
gacagttccccaacgtccccaaccccagagctggatgaggcctctccaaccacaactatg
ccaggacgtaaaacacagcccaacacaggaggttcaagggttagatgtcaggggacgacc
cagaacaccccgtctaaaccaggtgacaaagtaggcaatgtagccagtcggtcaaagtgc
ccccctcctccggttggacccaagtccaaagctgtcctgggcatggctaagggaaagggt
ctgaaagatggtggaaaggcagggatttctagtggggctccatcacaaaggacacctaat
gatggcagtgagaaaacaaaggttatgtcacctacgttaaaggatcaacccaccgcagga
aaaacagaggtcaccgacagccccaagtcgaaaattcccaaaaagtcacagacagaagct
gtatcaaaacctccactgtcaccaggcacaacctcagtggttgatgtttcagtggctgtg
tttttacctgtgcttggttccaaaccccagaagacccctaaacctaaacatttaatgatt
aaaacagacaaaaagcctatcaccgaggaggtgaatgaagtgggttcaggggggaaacca
actccagggcctgttacgccagaagaggcatcacctactaaagtaccagtcatgtcacct
gtgaactcagataaggtaaacctatccaatgggatggaaaaagaccctgaggacaacaac
actgacatagccaaaacaagtgaacccaaagatgtcaaaaagcaggctcccacacgccca
gacagcaccaacagcagcatgataccaaagagccggttacccaaagcccctaactctttg
tctctggtcagaaagatgaaagacggcaaactccaaaccatcgacacagggagtaaaact
accaagaccactgagagagcatcagttgtcaatagtaggccttccacaccaaccagccca
aagcagcaggagcttcccagcccagaggaaatgcccccagatgagacaatgaccactgaa
cctgagaagggaagcaagctgccctgccctttgcaaacaaacctgccccaacaggcctcc
aataagagcaccccccgtgttgacggggacacacccacccctccctcactgttaccaacc
aagccagagaaacccgcctcccttggacttaagaagaagagtaacatcacatctcccacc
atggacatgactgctgatgattctgggaagacttcaccactgagtttgaaaagtccagtg
aaagatccaagtgattctgtgactgtggctagcaagcgtgcaatgttccgtcaggtaact
cccccgaaaggcaagcccagcaagcccctcaagaaatatgagcaaactatgaactctgaa
acacaatctaaatccatacaagatcatgtgtcactggtcacagatgactctcaaatagat
gatcaacaaaccacaccagcaacacaccagcaactgtttgtaaatgatcaaacagatgaa
ccagcagtcactggaacaaataaatcactagaggacaggagcagtagtagtacacctgaa
acaaaaatggataaaatatctgaaaatggacaaaaaaaatcgatatcagtcaaaactacc
tgtattacaaaggaacaacaaaccaaaccatacgcagatctctcatccgagacagagagt
gaccacaactatgtggaagccttaaccaatacaccactgcagcagatgggtcctgtaagc
ccaggtgtagtcctggagaaacgcccaactgaaccaagcctcattgtgtctgcctcaagc
acacctacccatgaggaagtaatatatacatcaaccaagcctgaattgactgaccacatt
catactgacactgaggaccaagctaatcagaaaagtgatgagtacaatgaaaatacttct
acagcttcagagaagctcatacttagtgctggggaagggatatccaatacgaatcagcct
gtggaacatggcctggatgtagcaaaggatagctcacccaaaaacgcctccactgtggtt
gaaagaagagagagtcaagatacggcaacacagtcacccatctttggatcagaggaaaaa
tcgaagaaactagctaatgctcaaacccccgatatagtacctattcgtaatggcatagtt
tctgatatatccatagtgtctgggaaagagactgaagtacagaaggggggagagccagtg
aaggtctccgacatcataacagagcctgcgattgttctgaaaccaattaaaaatggtgag
gtccaactgaacaaagagcttccttcactgacacagaatttggcagatgcacatagcggg
ccacacaaagaaaacaaagaggacaaactgggtgaggcggcaactaagagcacagttact
aagatggatgccaaacaggaatcaaagaccataactacaaaagatcagaaggagaaagtg
acaaaacaagaagaaagacccagcgaaggagcgactaagatattagacacaaaacaggac
tcaaaatccataagaacaaaagctcaggagaaggtcttgctcctcaaagaaccccctaaa
acgacaaaagcaaaccccaaggctgagctgcctcttcagctgccaactcctctgaagctc
ccctctccctctaaacctctccctctgaaacaggaatctccgtccagctggctgaacgtg
gagcgcggctcaaaacaggagcagaagagggagaccaagagaaggctagactgttcagcc
agcgaggatgagagtctggctgagattgacaacgtggatgacttcatcaggagcattaag
gaactgggcaccccctttcccctgccccccaagaggcaccatgaccatgccaagacctcc
tcgcccccctttgccctgcccgccatcaaggaggaccgcttcgagaagccttttgacgct
gatggcttccagtttggcctgaaaaagaggaccaaggatgaagaaaccccggccatgttg
ataaagaaacaggccagggaggagaagacacagccaagaagggctaatgcagaggacagc
cttctcttcaaagccctccagtctccatctagagcccggagaaaaccagggtgtcaaaca
gatgggaaagatggagaggtgaacattaaagtagaggggaagagggaagtagagaagaaa
gaggagcaaggggaagaaaccggtcagctcacgtcacggctaggaaggatgtccctgctc
tccaacctattgagctcccccaggacttccagaaggaacaaaggggatccttcctcctca
gtctctaatggtgctcctccctctcctaccacccagggcacagtgccagaaagggcgggt
tggagaagtatgaatccgggcctgagtatgggtgtggttgcaactggtgagtcaataatc
agtccttcctcacctactcctctccccttgttcactgagctaaagctgccagatcccctg
gagcagtatctcaggacagacaaaggatcctcacagagtagtgctacacagagtacaatg
gctagccctgtaatgggcttaggtcacggtactggactaaagggacttaccttaggactt
catccagccaccaaccacatcccacaggcccctctgaatggtcttcctgcagccaaccct
aagattccagaagtgagagggttccacaaacggcctgggaagatagtgctccatgagcag
gctcagtttgaaggagaggcctacgaggtgtttggggacgtagaggatgcctccatgatg
aagctgtctcctgtcatctcagtcagggtcatcaggggatgctggctgctgtatgagaag
ccaaggttccaggggcggaccatcgccctggaggaggggcccatggagctggtcaacgtg
tgggcagaggaggtgacaccaggggcactggatcacatgggtctgcctgtgccaacctca
cccatggtcatcggatctatccgcctggcagtgagggactacagtctacctcggattgac
ctgttcactgaagtgaatggtctggggagaatgacatccttctgcgacgacactattgag
atctgctcttatgggaacatacagaacaccggctccatcaaggtccactctggagtctgg
ctggtgtatggtgacccagggtttgggggtctcttatcggtgttggaggcgggcgagtac
ccctgtccagaggcctgggcattccctcagcccttcattggatcgctgaaaacactcaaa
atgggtgggataaaggtggagcatcctaatgaagtaaaggctctggtgtacgagaggccg
tgcttcgagggcgagtgtgtggagattgacgatgatgtgtacgacttcagagagggagga
gagaagaaagaggggcgggtggaggaggtggtggaggaggaggcagaaggtaatccagtc
agaaggaagactttgtgttctgtgggatccatcaagatcattcgtggactctgggttggc
tatgatgaaccagagtttgaaggtcaccagtatctcctggaggagggggagtatcctgac
tggagggagtggggaggctacggagaccagctcctgtcacttcgccctgtacgcactgat
gtcctgtctccccatgtgaagttgttcagtgagagggactttggggagagaggggtcaac
atggacctgctagggcctgtcattaacatggaggacacaggcttcggctcgaagacacag
tccatcaatgtccagggtggagtgtgggttgcctttgagaaccctgggttctccggagaa
ctttacattctagagaaaggcctctacggaagcccagaggactggggaggaccgaacctc
aagatatcctcactgcagccagtcttccaggataacctgggtggatcaagcaagttcagg
ctccagctgttctcaaagcctgggttccagggcagagtggtggtactggaggacagtgtg
gtagccctggaggaagacttcttccctggctcctgtagagtactggctgggagctgggtg
gcgtatgaaggatcccagttcacagagcacatgtatgtcctggaggagggagactacccc
aataccaagtccatgggctgtctgggtcctgactctaccatccgctccatacagaccatc
agccatgagttctccctcccgtccataacgttgttcagtaaggttggctgtagaggccgt
agggtggtgctgacggaaggggtggtgaacctgcagctggctggggtggacggacgcata
cgctccctggttatcgacggaggaatgtgggtgctgtatgaggggtgtcatcaccgcggc
cgtcagatcctgctaccgcccagcaaactgggtgattggtgcaagttcagcagctggccg
cgaatcggatccctgcgaccactattgcagaagcaggtgtacttccgtctgcgaagcagg
gagaccggctacgtgatgtccctgtcagggcctctggatgacatcaagctgttgcgggtc
caggccctggaggagactgggggagtggaccaggtctggctcttccatgacggagtccta
cgctgcaagctggtggaggactgttgcctgcagatcacggggagcgttgtcatggcgggc
agcaggctgagtgtgtctcctccggagccagggaaagacaaccagctgtggaacattacc
ccagacggcctggtccgatgccacctcaaacctgatctggtgcttgaggttaaaggtgga
caaagttatgacaaaactcaagtgattctcaacacatttgatgagagaaaacacaaccaa
agatggtctttggagatcctgtaa
DBGET
integrated database retrieval system
