Oncorhynchus nerka (sockeye salmon): 115146355
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Entry
115146355 CDS
T07952
Name
(RefSeq) EARP-interacting protein homolog isoform X1
KO
K23289
EARP and GARP complex-interacting protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115146355
Membrane trafficking [BR:
one04131
]
Protein recycling
Others
Others
115146355
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EIPR1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
115146355
NCBI-ProteinID:
XP_029544247
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Position
LG18:36621111..36663432
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AA seq
389 aa
AA seq
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MEDDAPVIYGLEFQARALTSQTAESDAIRFLVGTQSLKFDNQIHIIDFDDENNIISKSVL
QHQAGEIWHISASPADKAVLTTCYNKTSESRVVTCGAVWRMPPEWESGSHESPDDPHNSH
NPQNLELLCHLDNSSHGNASCVLWEPMGDGKHVISLADNHALLWDLTESSTQATISSSAT
LEGKGQLKFTAGKWSPHHNCTQLATANDTAIRGWDLRTMSQIYCIENAHGQLVRDLDFNP
NKQYYLASCGDDCKVKFWDVRNINEPVKTLEEHSHWVWSVRFNHSHDQLVLTGSSDSRVI
LSNMVSISSEPFGHLVDDDDLSDGEDNHQDEKTKEPLQDSIISTYEEHEDSVYAVEWSSA
DPWLFASLSYDGRLVINRVPRALKYHILL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgatgcacctgtgatatacggcctcgaatttcaggctcgtgcacttacttct
cagacagctgaatcggatgccattcgttttcttgtgggcactcaatccctcaaatttgac
aatcagatccacatcattgactttgatgatgagaataacatcattagtaagagcgtcctg
cagcaccaggcaggggagatatggcacatcagcgccagtcctgcagataaagccgtgctg
acgacctgctacaacaaaaccagtgagagtcgcgtggtgacgtgtggggctgtttggagg
atgcccccagagtgggagtcaggcagccatgaatccccagacgatccccacaactcccac
aacccccagaacctggaactcctctgtcaccttgacaacagctcccacggcaacgcctcc
tgtgtcctgtgggagcccatgggagatgggaagcatgtgatctctctggctgataaccac
gctctgctctgggaccttacggagagctctacccaggccacgatctctagcagtgccacc
ttagagggtaaaggtcaactgaagttcacggctgggaagtggagtccacatcacaactgt
acccagctggccacagccaacgacacagccatcagaggctgggacctccgtaccatgagt
cagatctactgcatcgagaatgctcacgggcagctggttcgagacctggacttcaaccct
aacaaacagtactacctggccagctgtggggacgactgcaaggtcaaattctgggacgtg
agaaacatcaacgagccagttaagaccctggaagagcactcccactgggtgtggagcgtg
cgcttcaaccactctcatgaccagctggtgctgaccggcagcagcgacagcagggtgatt
ctgtccaacatggtgtccatctcctccgagcccttcggtcacctggtggatgacgatgac
ctcagcgacggagaggacaaccaccaggacgagaaaactaaggagcccctgcaggacagt
atcatctctacctatgaagagcatgaggacagtgtatacgcggtggagtggtcctcggca
gacccatggctctttgcctcactcagctacgatggcagactggtcatcaacagggtcccc
cgcgcactcaaataccatatcctgctctag
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