Oncorhynchus nerka (sockeye salmon): 115146421
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Entry
115146421 CDS
T07952
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein R isoform X1
KO
K13161
heterogeneous nuclear ribonucleoprotein R
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115146421
Spliceosome [BR:
one03041
]
Complex C
Other components
hnRNP proteins
115146421
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
hnRNP_Q_AcD
RRM_7
RRM_5
RBD_RDR6
RRM_occluded
DUF1866
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
115146421
NCBI-ProteinID:
XP_029544334
LinkDB
All DBs
Position
LG18:40504571..40536242
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AA seq
632 aa
AA seq
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MAAEVNGSSAPVKEEDEPMDITVTHTENYQTLIDAGLPQKVAESLDKIFQTGLVAYADLD
ERAIDALREFNEEGALSVLQQFRESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQESTKG
PDETKIKALLERTGYTLDVTTGQRKYGGPPPDEVYSGAQPGIGTEVFVGKIPRDLYEDEL
VPLFEKAGPIWDLRLMMDPLLSGQNRGYAFITFCNKDAALEAVKLCDNYEIRSGKYLGVC
ISVANNRLFVGSIPKNKTRESILEDFSKVTEGLVEVILYHQPDDKKKNRGFCFLEYEDHK
TAAQARRRLMSGKVKVWGNPVTVEWADPVDEPDPEIMAKVKVLFVRNLATPVTEELLEKT
FSQFGKLERVKKLKDYAFVHFEDRDAAVKAMQQMNGKELEGEEIEIVLAKPPDRKRKERQ
AQRQPTRTTGYDDYYYYPAPRMPPPMRGRGRGGRGGYAYPPDYYGYEDYYDDYYGGGYDY
HDYRGGYDDPYYGGYDDVYVPRGRGGRVSRGAPPPPRGRGAPPPRGRGGYVQRGAPMGVP
RGSRGSRGGPPQQRGRGIRGARGNRGDNLGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQ
QPLQQGGDYSGNYGYNNDNQEFYQDSYGHQWK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgaagtgaatggcagttctgctccagttaaggaggaagacgaaccaatggac
ataacagtaacacacacagagaactaccagacactcatagacgcaggccttccacagaaa
gtggcggagagcctggataagatatttcagactggactggtggcttacgctgacctggac
gagagagccatcgacgccctgagggagttcaatgaggagggagccctgtcagtgttacag
cagttcagggagagtgacctgtcacatgtgcagaacaaaagtgcatttctctgtggtgtg
atgaagacataccgacagcgagaaaagcaaggaagtaaagttcaagaatccacaaagggt
cctgatgagactaagataaaggctcttctggaaagaacaggttacactttggacgtcacc
acaggacagaggaagtatggggggcctccacctgacgaggtgtactcaggggcccagcct
ggaatcggaacagaggtatttgttggcaagatccccagagacttgtatgaggatgagctg
gtgcctctgtttgagaaagccgggcccatttgggacctgcgtctaatgatggatcccctc
ctttcgggtcagaacagaggatatgccttcatcaccttctgcaataaagatgctgcccta
gaggccgtcaagctttgtgataattatgaaatccggtcgggcaaatacctgggtgtctgc
atctctgtcgcaaacaatcggctgtttgttgggtcaattccaaagaacaagacaagagaa
agcatattggaagatttcagcaaagtcacagagggcctcgtggaggtgatactctaccac
cagccagatgataaaaagaagaaccgtggcttctgcttcttagaatacgaggaccacaaa
actgcggcccaggcccgtcgccgcctcatgagtggcaaggtgaaggtgtgggggaaccct
gttactgttgagtgggcagatccagtagacgaaccggacccagagattatggcaaaggta
aaggtgctgtttgtgaggaacctggccacaccggtcacagaggagctcctagagaaaacg
ttctcccagtttgggaagttggagcgggtcaagaagctgaaagactatgcctttgttcac
tttgaggacagagatgctgccgtgaaggcaatgcaacaaatgaatggcaaagaattggaa
ggcgaggagatagagattgttctggcaaagcctccggacaggaagaggaaagagcggcag
gcccagagacagccaactaggaccacaggatatgatgattactactattatcctgctcca
cgcatgccgcctcccatgcgaggcaggggccgaggtgggagaggtggctatgcctaccct
ccagactactacggttacgaggactactacgatgattactacgggggtggttacgactac
catgactaccgaggtggctacgacgacccttactacgggggatacgatgacgtctacgtg
ccgagaggaagggggggcagggtgagtcgaggtgccccccctccccctagaggccgagga
gcaccaccccctcgtggcagaggtggctacgtccaaaggggggctcctatgggtgtaccg
aggggaagccgtgggagccggggaggtccgccccagcagaggggccgcggcatcagaggg
gccaggggaaaccgcggggacaacttgggcgggaagaggaaggctgacggttacaaccaa
ccggactccaagcgccggcagaccaacaaccagaactggggctcccaacccattgcccag
caacccctgcaacaaggtggcgactactctggtaactatggttacaataatgacaaccag
gagttttaccaagattcttatgggcaccaatggaagtag
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