Oncorhynchus nerka (sockeye salmon): 115146445
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Entry
115146445 CDS
T07952
Symbol
wdr20
Name
(RefSeq) WD repeat-containing protein 20
KO
K24741
WD repeat-containing protein 20
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115146445 (wdr20)
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
115146445 (wdr20)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
ANAPC4_WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
115146445
NCBI-ProteinID:
XP_029544381
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Position
LG18:42557288..42565047
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AA seq
598 aa
AA seq
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MLLFILKMAAEGGGKELNEIKTQFNTREGVYKLLTHSEYSRPNRVPFNSQGSNPVKVSFV
NVNDQSGNGDRICFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATA
DSVSLLVGFSAGQVQLIDPIKRETSKLFNEERLIDKSRVTCVKWVPGLERLFLVAHSSGN
MYLYNVENTCGTTAPHYQLLKQGKNYSVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGK
FLACVSQDGFLRVFNFDAVELHGTMKSYFGGLLCMCWSPDGKYIVAGGEDDLVTVWSFVD
CRVIARGHGHKSWVSVVAFDHYTTSVEDADPMEFNGSDEDFQGLHFGRDRANSTQSRLSK
RNSTDSRTVHTTYRFGSVGQDTQLCLWDLTEDILFPHLPLSRTRTHTNVMNATSPPAGGE
VAGDIVNNVSNNPSTNDSGANTPSNSLSSPLPRSNSLPHSPAMTANNKSSAIASGVSKFA
TLSLHDRKEQHQETDHKRNHSMGHISSKSSDKLNMLTKSRTDPAKTLGTPLCPRMEDLPL
LEPLICKKIAHERLTVLIFLEDCIVTACQEGFIWTWARPGKVGLSSQKQAVSPSGTII
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgttattgttcattttaaagatggcggcggagggaggagggaaggagttgaacgaaatt
aaaactcagttcaatacacgggaaggcgtctataaactcctcactcactccgaatatagc
cgccccaacagggtgccttttaattcccagggttcaaaccccgtcaaagtatccttcgtc
aacgtcaatgatcagtctggtaacggcgacagaatatgttttaatgtgggccgggaactg
tacttctacatctacaaaggcgttagaaaggcggctgacttgagcaagcctatcgacaag
aggatatacaagggaacacagcccacatgtcatgacttcaaccacctgacggccacggcg
gacagcgtctccctgctggtgggcttctcggcaggccaagtgcagctcatcgaccccatc
aagagggagaccagcaagctcttcaatgaggaaagactaatagacaaatccagagtgact
tgtgtaaaatgggtgcccggcttagagaggttgttcctagtcgctcattccagtggaaac
atgtacttgtacaacgtagaaaacacgtgtggcaccacggcgcctcactaccagttgctc
aaacagggcaagaactactctgtgcacacgtgtaagagcaaatccacgcgcaaccctttg
ctcaaatggacggtgggcgagggagcgctcaacgagtttgccttttcacccgacgggaag
tttctggcgtgtgtcagccaggacggcttccttcgggtcttcaactttgacgcggtggag
ctgcacgggaccatgaaaagctactttgggggtctgctgtgcatgtgctggagtccggac
ggaaagtacattgtcgcggggggcgaggatgatctggtgactgtgtggtcgtttgtggac
tgccgggttattgcgcgcggtcacggacacaaatcatgggtcagcgtggtggcgtttgac
cactacacaaccagcgtggaggatgcagaccctatggagttcaacggcagcgacgaggac
ttccagggcctccactttggtcgcgaccgggccaacagtacgcagtcccggctctccaaa
cgcaactccacagacagtcggacagtacacaccacgtacaggtttggctcagtgggccag
gacactcagctgtgcttgtgggacctcacagaagatatacttttcccccacctcccgctt
tcccggacaagaacacacaccaatgtgatgaacgctaccagccccccggcgggaggtgaa
gtcgctggtgacatagtgaacaatgtgagtaataaccctagcacgaacgatagcggcgcc
aacacccccagtaactccctctcctctcccctgccacgctccaacagcttaccgcactcg
ccagctatgactgccaacaacaagagcagtgccatcgcctcgggtgtcagcaagttcgca
acgctctcccttcacgatcgcaaagagcagcaccaggagacggaccacaaacggaaccac
agcatgggtcacattagcagcaagagcagtgacaagctcaacatgctcaccaaatccaga
acagaccctgcaaagactctggggacaccgctctgtccccgcatggaagacctaccccta
ctagagcctcttatctgtaaaaagatagcacatgagagactgactgtcttaatatttctt
gaggactgtatagtgacagcttgtcaggagggatttatttggacatgggcgaggcctgga
aaagtgggtttgtcatcccaaaagcaagcagtctctcccagtggaacgataatatag
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