KEGG   Oncorhynchus nerka (sockeye salmon): 115146452
Entry
115146452         CDS       T07952                                 
Symbol
lrr1
Name
(RefSeq) leucine-rich repeat protein 1
  KO
K10348  LRR-repeat protein 1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115146452 (lrr1)
Ubiquitin system [BR:one04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Target recognizing subunit
     115146452 (lrr1)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_14 LRR_1 LRR_LRWD1 LRR_9 LRR_Zer-1 LRR_R13L1-DRL21 UCH_N NoBody
Other DBs
NCBI-GeneID: 115146452
NCBI-ProteinID: XP_029544393
LinkDB
Position
LG18:complement(42608337..42613916)
AA seq 421 aa
MKLQCDVEVVNRMLPTYGMKNRGKGARAVLSIGRHVDKTTQRHNIYLMICTAKDRTGTKY
KLKENIETFFTRFVEEGKATVRLKEPVVDICLSKADANSLKNFLSAARLAHRGNDMDSLP
LSTLTPVRARDVEKPKKKLTIVSKKDYPLTSNFPYSLEQLQVSYCKLSRVDMRMLSLKAL
RRLDLSNNNIKKLPDTIGDLGCLAELILHNNHLETFSEALCLSSLQRTLQHLDLSQNRLQ
ALPPHFCQLRELINLKMDNNGLVWLPFRISHLSKLRFLSAAHNQLALLPGDFRKLNLENL
DLFGNPFAHPNPLDHTIQLTFPLTLQEMAARAVANLRIPYGPHLIPAHLCQDLEVAKTCD
CGCTCVNYYIKTAVSMNLHLVSHTVVLVDDMGGTDAPVQHHFCSLSCYSEFLDQCLQRGL
R
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaagcttcagtgcgacgtcgaagtcgtgaaccggatgcttcccacgtatgggatgaaa
aacagaggaaagggagcaagggctgtgctgtctattgggagacatgtggacaagaccaca
caacgccacaacatttatctaatgatctgtacagcaaaggataggacaggaacgaaatat
aagctaaaagaaaacattgaaacattcttcaccaggtttgttgaggagggcaaagccact
gtgagactgaaggagcccgttgttgacatctgcttgagcaaggctgatgctaacagcttg
aagaacttcctctcggctgctcggttggctcacagaggaaatgacatggacagcctgcct
ctctctacactgacgcccgtccgagccagggatgtggagaagcccaagaagaagctgact
attgtatccaagaaggactatccattgacctccaattttccctactcattagagcagctc
caggtgtcctactgcaagctctcacgggtggacatgcgaatgctctccctcaaggcactg
cgcagactggacctcagtaataacaacataaaaaaacttcctgacaccatcggtgacctg
ggctgcctggctgagcttattctccacaacaaccacttagagacctttagtgaagccctc
tgcctgtccagccttcagcgcacacttcaacacctcgacctgagtcagaaccgcctgcag
gccctgccgcctcacttctgccagctgcgagagctgatcaacctcaagatggacaacaac
ggactggtgtggctgccctttcgcatcagccatctctccaagctgcgctttttgtcagct
gcacacaaccagctggccctgctgccaggggacttccgaaagttaaatctggagaacctg
gacctgtttggtaatccgttcgcccatcccaaccccctggaccacaccatccagctcacc
ttccccctgacactgcaggagatggccgccagggctgtggccaacctcagaatcccttac
gggcctcatctcatccctgcccacctttgtcaagacctggaggttgccaagacctgtgac
tgtggctgtacctgtgtgaactactacatcaaaacagcagtcagcatgaatctgcatctg
gtgtctcacactgtggttttggtagatgacatgggaggaacagatgcaccggtgcagcat
cacttttgctccctatcatgttactctgagttcctggaccaatgccttcagcgaggcctg
agatga

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