Oncorhynchus nerka (sockeye salmon): 115146457
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Entry
115146457 CDS
T07952
Name
(RefSeq) transcriptional repressor protein YY1-like isoform X1
KO
K09201
transcription factor YY
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115146457
03083 Polycomb repressive complex
115146457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115146457
03036 Chromosome and associated proteins [BR:
one03036
]
115146457
03029 Mitochondrial biogenesis [BR:
one03029
]
115146457
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115146457
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115146457
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
115146457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
TFIIIA_zf-C2H2
C2H2_ASCIZ
DUF4114
Raffinose_syn
IBR
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
115146457
NCBI-ProteinID:
XP_029544405
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Position
LG18:complement(42950879..42956654)
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AA seq
364 aa
AA seq
DB search
MASGDTLYIETDGSEMPSEIVELHEIEVETIETTVVGEDDDEQPMIALQPLDSDDPHSMH
HHHQEVILVQTREEVVGEDDSDMHGDDDYEDQILIPVPVPAAEEEYIEQTLVTVAGKSSG
RTKKGGSGKRNKKNYLGAPESSGRKWEQKQVQIKTLEGEFSVTMWASDDKKDVDHDTMGE
EHVIGDNSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFASGPRSVISCRMKPRKIKED
DSPRTIACPHKGCSKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGE
KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA
KNNQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggtgataccctgtacatcgaaacggacggctcggagatgccgtcagaaata
gtggaactccatgaaatcgaagtggagacaatcgagacaacagttgttggagaggacgac
gatgaacagccaatgatcgctttacagcccctcgactcagatgatccacactcaatgcat
caccatcatcaggaggtaatattggtgcaaactcgagaagaggtggttggtgaagatgat
tcggacatgcacggggacgatgattacgaggaccaaattcttatacctgtcccagtccct
gccgccgaagaggaatacatcgaacagactctggtgactgtcgctgggaagagctcgggg
cggacgaagaaggggggaagcgggaagagaaataaaaagaactacttgggtgcaccggag
tccagtggtagaaaatgggaacagaaacaagtccagataaagactttggaaggagagttt
tcggtgacgatgtgggcatcggatgacaagaaggatgttgaccatgacactatgggagag
gagcatgtcattggggataattctcctcccgattactcggagtacatgacagggaagaag
ctcccgcctggaggcattccaggcatcgacctgtcagaccccaaacagctggcagagttc
gctagtggaccacgatctgtcatctcttgcaggatgaagccacggaaaatcaaggaggac
gactctcccaggacgatagcttgccctcacaaaggatgcagtaaaatgttcagggataac
tctgcaatgaggaagcacctgcacacccacggaccacgtgttcacgtctgcgccgaatgt
ggaaaggcctttgtcgaaagctccaaactgaagaggcatcaacttgttcataccggcgag
aagcctttccaatgcacatttgagggttgcggaaagcggttctccctggactttaactta
cgcacgcacgtgcggattcacactggagaccgaccctacgtctgtccgtttgacggctgc
aacaagaagtttgcccaatccaccaacctcaagtctcacatcctcacacacgctaaagct
aaaaacaatcagtga
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