Oncorhynchus nerka (sockeye salmon): 115146519
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Entry
115146519 CDS
T07952
Name
(RefSeq) platelet-activating factor receptor-like
KO
K04279
platelet-activating factor receptor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04020
Calcium signaling pathway
one04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115146519
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115146519
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
one04030
]
115146519
G protein-coupled receptors [BR:
one04030
]
Rhodopsin family
Others
Platelet activating factor
115146519
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srv
CitMHS
Bac_export_2
DUF3382
UPF0182
Motif
Other DBs
NCBI-GeneID:
115146519
NCBI-ProteinID:
XP_029544472
LinkDB
All DBs
Position
LG18:40965163..40968500
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AA seq
370 aa
AA seq
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MEMEEDTTVNISTVGKITFLDSEFRYTLFPVFYGVVFVLGLIANSYVLFVLQRLRNAKAM
NEIRIYMANLTVADLLFVCALPFWIGYYHHRGDWRYGDILCRVTGAFFFINTYCSILFLA
AISVNRYWAITRPLDAASSDHWRRGVAITVVIWALTLSMSVPYLLETGIQVDDSNVSRCF
EGYHNKTDDEKRTVATTHLIIVGCFILVFFLVVICNLLIARALLTQSPTQTRGSSSSQLR
GVKGQALQMLCAVVGVFVVCFLPHHVVQGPWTLAVLDIKEGWGRMDWGQRTRQWLNDAHQ
VTLMLMGLNCLLDPVVYCFATRKFRMYIKDNLKKVGRGKGCSETAITHISMVECKNVSQR
LHSEQQQLKV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaagaggacacgacagtgaacatatcgacagtcggtaaaataacctttctg
gactctgagttccgttacaccctcttcccagtgttttacggtgttgtgttcgtccttggt
ctgatagccaacagttacgtgctgttcgtgctgcagcgcctgcgcaacgccaaggccatg
aatgagatccgcatctacatggccaacctgactgttgccgacctcctcttcgtgtgcgcc
ctccccttctggattggctactaccaccaccgcggtgactggcgctacggcgacatcctg
tgccgcgtcaccggggcgttcttcttcatcaacacctactgctccatcctcttcctcgcc
gccatcagcgtcaaccgttactgggccatcacacgcccgctggatgccgcctcgtctgac
cattggcgccgcggggtggccatcacggtggtcatctgggcgctcactctgtccatgtcc
gtgccgtacctcttggagacgggcatccaggtggacgacagcaacgtgtcgcgctgcttt
gagggctaccacaacaagactgacgacgagaagcggactgtggccaccacccacctcatc
atcgtggggtgcttcatcttggtcttcttcctcgtagtaatctgtaacctgctcatcgcc
cgtgccctgctcacccagtcccctacccagactcggggctccagttcatcccagctccgg
ggggtgaagggccaggccttgcagatgctgtgtgccgtggtgggggtgtttgtggtgtgc
ttcctcccccaccacgtggtccagggtccctggactctggctgtactggatatcaaggag
ggctggggaagaatggactggggccagcggaccaggcagtggcttaacgacgcccaccag
gtcaccttgatgctgatggggctcaactgcctcctggaccctgtggtgtactgcttcgcc
accaggaagttccgcatgtacatcaaggacaatctgaaaaaggtggggaggggcaaagga
tgctcggaaacagccatcacacacatttctatggtggagtgcaagaatgtgagccagcgg
ctccatagcgaacagcagcagctgaaggtttaa
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