Oncorhynchus nerka (sockeye salmon): 115146549
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Entry
115146549 CDS
T07952
Name
(RefSeq) syntaxin-3-like isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115146549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115146549
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115146549
Membrane trafficking [BR:
one04131
]
SNARE
Syntaxin (Qa)
Stx-PM
115146549
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
115146549
Exosomal proteins of other body fluids (saliva and urine)
115146549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Relaxase_C
AAA_13
FUSC
YtxH
Med11
FlaC_arch
EzrA
STX6_10_61_N
DUF1664
CorA
Baculo_F
Motif
Other DBs
NCBI-GeneID:
115146549
NCBI-ProteinID:
XP_029544496
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Position
LG18:complement(6209946..6217064)
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AA seq
372 aa
AA seq
DB search
MKDRLEQLKAKSDVAGDDVEVPVENQAFMDDFFAQIEEIRSSIDKIDESVAQAKKLYSTI
LSAPTSEQKTQDDLEAVTNDIKKAAGTARNKLKSIEKQLETNTEERSSADTRIRKSQHAI
LAKKFVEVMTKYNEAQTDFRDKSKGRIARQLEITGKTTTDEELEEMLEGGNAAVFTAGIM
ESGISKQALNEIEARHKDIVRLESSIKELHDMFVDIAMLVENQGGMIDKIESNMDQSVGF
VERAVADTKKAAKFQQEARRVKLKRSVPDYPQSNLGGWINSGHCLSRDTFSATQRRYTSV
RLKAFHPTLSFVFSLSLFFHLFLSLSHTHTHTLSLSLFSLSLSRSFFKACFPPQLLFPLQ
GFVSISFGSVLP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgactggaacagttgaaggcgaaaagtgatgtggctggggacgatgtggag
gttccagtggagaaccaagcctttatggatgacttcttcgcccagattgaggagattcgc
agcagcatcgataagatagatgagagtgtggcgcaagcaaagaagctgtactcgaccatc
ctctccgcccctacatcagagcagaagacgcaagatgacttggaggcggtcaccaacgac
atcaagaaagcagccggcaccgctcgcaacaaactaaagagtatcgagaagcaacttgag
acaaacacagaggaacggtcgtcagcagacacgaggatccggaagtcccagcatgccatc
ctggccaagaagtttgtggaggtgatgaccaagtacaacgaggctcagacggactttaga
gacaagagcaaaggccgcatcgcccggcagctggagatcacgggaaaaacaacaaccgac
gaggagctggaggagatgttggaaggagggaacgcagccgtcttcaccgcagggatcatg
gagtcgggtatatcgaagcaggcgttgaatgagattgaggcgcggcacaaagacattgtg
aggctggagagcagcatcaaagagcttcatgacatgtttgtggacattgctatgctggtg
gagaaccagggcggtatgattgacaagattgagagcaacatggaccaatcggtgggcttc
gtagagcgggcggttgccgacaccaagaaagcagccaaatttcagcaggaggcccgtagg
gtgaagttgaagaggagtgtcccagattacccccagtctaacctgggtggatggatcaac
agtggacactgtctgtcaagagatacattcagcgctactcagaggagatacacctcagtc
cggctaaaggccttccaccctacattgtctttcgtcttctctctctctcttttcttccat
ctttttctctctctctcacacacacacacacacacactctctctctccctcttttccctc
tctctctctcgttctttttttaaggcatgcttccccccacagctccttttcccacttcaa
ggatttgtgtcaattagctttggtagtgtgcttccttaa
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integrated database retrieval system
