Oncorhynchus nerka (sockeye salmon): 115146605
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Entry
115146605 CDS
T07952
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115146605
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115146605
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
C2-set_3
Ig_5
Motif
Other DBs
NCBI-GeneID:
115146605
NCBI-ProteinID:
XP_029544537
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Position
LG18:complement(23001574..23052220)
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AA seq
793 aa
AA seq
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MEKLLVCLLVIGMAVKAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLAD
NFVTSIKRKDFANMTRLQDLTLSRNTISFITPHAFSDLENLRALHVNSNRLTRISNDTFS
GMSKLHHLILNNNQLMLIHLGAFNDLLALEELDLSYNNLESIPWEAIQRMTSLHTLSLDH
NMIDYIPEETFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMNPSSFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPQHLSGRYFWSIPEEEFLCEPPLITRYSHEMRVLE
GQRVALRCKARGDPEPAIHWISPEGKLVSNSSRTLVYTNGTLDILISTVKDTGSFTCISS
NPAGEAHQTVELLIIKLPHISNSTNNIQEPDPGSSDISTSTRAGANGSNHTGDTKTSPDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGSYDDSLVYRMIPPTSKNFLVNNLAAG
TSYDLCVLAIYDDGITSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNTSDSGKGTLVTNVHSQTNGAQSQGCTVNPSVSKQAVGGSGSEG
GGGGSIKAAGHAPDTLTDSSETSLPDCSTATSLVSQSWNTPGSSGSLKPKRKPAPKPSAT
ASVTPEPKVEALPNAETQNTNRNNSTALQHPPAPVFHSPLPYSRIKDTPILRRAHPRPSS
KYLTLPVEGVRAKRRYSLNEDSSKHHCYIGVTKLGNMWSKRSKSMNGMLLQQENIDSGKA
TISSSEWILESTV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgctggtctgtctgttggttattggaatggcagtgaaggcccagatctgt
ccgaagcgctgtgtctgtcaaatactatctcccaatcttgcaaccctctgtgccaaaaaa
ggtctcctctttgtccccccgaacattgacaggcacaccgtggagctacggctggcagac
aacttcgtcaccagcatcaagaggaaagactttgccaacatgaccaggttgcaggacctc
accctgtcaaggaataccattagcttcatcacgccacacgcgttttctgacctggagaac
ctccgcgccttgcacgtgaacagcaaccggctgacccggatatccaacgacacctttagc
ggcatgtccaagctgcaccacctgatcctcaacaacaaccagctgatgttgatccacctg
ggggctttcaatgatctgctggccctggaggagctcgacctgtcctacaacaacttggag
tccatcccctgggaggctatccagaggatgacgagcctccacaccctcagcctggaccac
aacatgatcgactacattcctgaggagaccttttctcttctgcaaaagctcaaccgcttg
gacgtaacctcaaataagttacagaagcttcctccagatcctctgttccagcgggcccag
gttttggccacgtctgggatcatgaacccttcctcgttcgcactgagcttcggcgggaac
ccactgcactgcaactgtgagttgctgtggctgaggcgcctgagtcgagaggatgatctg
gagacatgcgcatcgccgcagcacctctctggacgctatttctggtctatcccagaggag
gagttcctgtgtgaacctcctctcatcacccggtactcccatgagatgagggtgctggag
ggccagagggtggccctgaggtgcaaggccaggggggaccctgagcctgccatacactgg
atctctccagaggggaagctggtgtcgaactcctcccggacgttggtctacacgaatgga
accctggacattttgatcagcactgtgaaggacacaggatccttcacctgcatctcatct
aacccagctggtgaggcacatcagactgttgagctgctgattatcaaactcccacacatc
tccaacagcaccaacaacatccaggagcctgaccctggctcttcagacatctccacgtcc
accagggctggggcaaatggcagcaaccacactggagacactaaaactagtccggataag
agagtggtcatcgctgaggccacatcctccacagcactcatcaagttcaacttccagagg
aatatacctgggatccgcatgttccagattcagtacaatggcagttatgatgactctctt
gtgtacagaatgattccccccacaagcaaaaacttcctagtcaataacctggctgctgga
acgtcgtatgacctgtgtgttctggccatatacgacgacggtatcacttccctcaccgcc
acccgcgtggtgggctgcgtccagttcaccaccgagtctgagtacctgcgctgtcacttc
atgcagtcccagttcctgggaggcaccatgatcatcatcatcggcggcatcatcgtggcc
tccgtcctcgtcttcatcatcatcctcatgatccgctataaggtctgcaacaccagtgac
tcgggcaaaggcacattggtcaccaacgtccactcccagaccaatggggcgcagtctcaa
gggtgcaccgtcaatccctctgtgtccaaacaggccgtgggagggtcagggtcagaggga
gggggaggagggtctataaaggccgctgggcacgcgccagacactctgacggactcatct
gagacctctctcccagactgctccactgctacttctctggtgagccagagctggaacacg
cctggctcctcagggtctctgaagccaaagcgcaagcctgcgccaaagccctccgctact
gcttctgtcacccctgagcccaaggtagaggccctccccaacgctgagacccagaacacc
aaccgcaacaactccacggctctgcagcatcctcccgccccggtatttcactccccccta
ccctactcacgcatcaaggacacgcccatattaagacgcgcacaccccagaccatcctcc
aagtacctgaccttaccggtggaaggggtgagggccaaacgtaggtactctctaaacgag
gactcgtccaagcaccactgctacattggggtaacaaaacttgggaatatgtggtctaag
cggagtaagtccatgaatgggatgctacttcaacaggaaaatatagacagtggcaaggcc
accatttccagttcagagtggattctagaaagtactgtgtga
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