Oncorhynchus nerka (sockeye salmon): 115146680
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Entry
115146680 CDS
T07952
Symbol
cldn12
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-12
KO
K06087
claudin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03272
Virion - Hepatitis viruses
one04382
Cornified envelope formation
one04514
Cell adhesion molecules
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
115146680 (cldn12)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115146680 (cldn12)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115146680 (cldn12)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115146680 (cldn12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115146680 (cldn12)
04147 Exosome [BR:
one04147
]
115146680 (cldn12)
04515 Cell adhesion molecules [BR:
one04515
]
115146680 (cldn12)
Cilium and associated proteins [BR:
one03037
]
Other cilia and associated proteins
Stereociliary proteins
115146680 (cldn12)
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
115146680 (cldn12)
Exosomal proteins of colorectal cancer cells
115146680 (cldn12)
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
L1 family
115146680 (cldn12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Clc-like
Motif
Other DBs
NCBI-GeneID:
115146680
NCBI-ProteinID:
XP_029544607
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All DBs
Position
LG3:99497..102963
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AA seq
341 aa
AA seq
DB search
MSCRDIHATNAFSFIIAFISVGGIAVAALIPQWRVTRLVTFNKNAKNISVYDGLWAKCVK
QDGYSGCYYYDSEWYSKVDQLDLRLLQFCLPTGLLFGSLALVLCMAGMSKTCCCSDKAET
DIKNTRCLVNSAGCHLVAGMFLFLGGAIALAPSVWFLFRTKEMNIRYDRIFSDGFAVYVA
IGCSGGLMLAALLMFMWYCMCKKLPSPFWLPLPTLPNSLSIQPLTANGYPPSPVYGPPQT
FPPQGYVPTVMDAQPYAPSQGYPQSVAPLAQQPQQVYMSQMSSPDGYGSEVGQNQAYSYA
PSQSYAPSQVGYAPSYIGHRYSTRSRMSGIEIDIPVLTQGL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgccgggacatccacgccaccaatgccttctccttcatcatcgccttcatctcc
gtgggcggcatcgctgtggcggcgctgatcccacagtggcgagtgacacgacttgtcacc
ttcaacaaaaacgccaagaacatcagcgtctatgatggcctgtgggccaagtgtgtgaaa
caagatggctactctggctgctactactacgactcagagtggtattctaaagtggaccag
ttggacctgcgactgctccagttctgcctgccgactgggctactgtttggctccctggcc
ctggtgctatgtatggcaggcatgtctaagacatgctgctgctctgataaggctgagaca
gacatcaagaatacccgctgtctggtcaacagcgcaggctgccacctagtggccgggatg
ttcctgttcctgggcggtgctatcgccctggcgccttccgtgtggttcctgttccggacc
aaagagatgaacatcaggtacgaccgcatcttctcagacgggttcgcggtctacgtggcc
atcggctgttctggcggcctcatgctcgccgccctgctgatgttcatgtggtactgcatg
tgtaagaagctaccctctcccttctggctgcctctccccacactccctaactccctctcc
atccagcccctcacagccaacgggtaccccccctcccccgtctacggaccccctcagacc
ttccctccacaggggtacgtccccactgtgatggatgcccagccctacgctccctcccag
ggctaccctcagagcgtagccccactggcccagcagcctcagcaggtctatatgtcccag
atgtcatccccggatgggtatgggtcagaggtgggtcagaaccaggcttacagctatgcc
ccgtcccagagttatgccccctctcaggtgggctacgcccccagctacataggccaccgc
tactccacacgctcacgcatgtctggcatagagatagacatccctgttctaacacaaggc
ctctga
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integrated database retrieval system