KEGG   Oncorhynchus nerka (sockeye salmon): 115146680
Entry
115146680         CDS       T07952                                 
Symbol
cldn12
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-12
  KO
K06087  claudin
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03272  Virion - Hepatitis viruses
one04382  Cornified envelope formation
one04514  Cell adhesion molecules
one04530  Tight junction
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    115146680 (cldn12)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115146680 (cldn12)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    115146680 (cldn12)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    115146680 (cldn12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:one03037]
    115146680 (cldn12)
   04147 Exosome [BR:one04147]
    115146680 (cldn12)
   04515 Cell adhesion molecules [BR:one04515]
    115146680 (cldn12)
Cilium and associated proteins [BR:one03037]
 Other cilia and associated proteins
  Stereociliary proteins
   115146680 (cldn12)
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   115146680 (cldn12)
  Exosomal proteins of colorectal cancer cells
   115146680 (cldn12)
Cell adhesion molecules [BR:one04515]
 Immunoglobulin superfamily
  L1 family
   115146680 (cldn12)
SSDB
Motif
Pfam: PMP22_Claudin Clc-like
Other DBs
NCBI-GeneID: 115146680
NCBI-ProteinID: XP_029544607
LinkDB
Position
LG3:99497..102963
AA seq 341 aa
MSCRDIHATNAFSFIIAFISVGGIAVAALIPQWRVTRLVTFNKNAKNISVYDGLWAKCVK
QDGYSGCYYYDSEWYSKVDQLDLRLLQFCLPTGLLFGSLALVLCMAGMSKTCCCSDKAET
DIKNTRCLVNSAGCHLVAGMFLFLGGAIALAPSVWFLFRTKEMNIRYDRIFSDGFAVYVA
IGCSGGLMLAALLMFMWYCMCKKLPSPFWLPLPTLPNSLSIQPLTANGYPPSPVYGPPQT
FPPQGYVPTVMDAQPYAPSQGYPQSVAPLAQQPQQVYMSQMSSPDGYGSEVGQNQAYSYA
PSQSYAPSQVGYAPSYIGHRYSTRSRMSGIEIDIPVLTQGL
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgtcgtgccgggacatccacgccaccaatgccttctccttcatcatcgccttcatctcc
gtgggcggcatcgctgtggcggcgctgatcccacagtggcgagtgacacgacttgtcacc
ttcaacaaaaacgccaagaacatcagcgtctatgatggcctgtgggccaagtgtgtgaaa
caagatggctactctggctgctactactacgactcagagtggtattctaaagtggaccag
ttggacctgcgactgctccagttctgcctgccgactgggctactgtttggctccctggcc
ctggtgctatgtatggcaggcatgtctaagacatgctgctgctctgataaggctgagaca
gacatcaagaatacccgctgtctggtcaacagcgcaggctgccacctagtggccgggatg
ttcctgttcctgggcggtgctatcgccctggcgccttccgtgtggttcctgttccggacc
aaagagatgaacatcaggtacgaccgcatcttctcagacgggttcgcggtctacgtggcc
atcggctgttctggcggcctcatgctcgccgccctgctgatgttcatgtggtactgcatg
tgtaagaagctaccctctcccttctggctgcctctccccacactccctaactccctctcc
atccagcccctcacagccaacgggtaccccccctcccccgtctacggaccccctcagacc
ttccctccacaggggtacgtccccactgtgatggatgcccagccctacgctccctcccag
ggctaccctcagagcgtagccccactggcccagcagcctcagcaggtctatatgtcccag
atgtcatccccggatgggtatgggtcagaggtgggtcagaaccaggcttacagctatgcc
ccgtcccagagttatgccccctctcaggtgggctacgcccccagctacataggccaccgc
tactccacacgctcacgcatgtctggcatagagatagacatccctgttctaacacaaggc
ctctga

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