Oncorhynchus nerka (sockeye salmon): 115146769
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Entry
115146769 CDS
T07952
Symbol
ttc6
Name
(RefSeq) tetratricopeptide repeat protein 6
KO
K24929
tetratricopeptide repeat protein 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115146769 (ttc6)
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
115146769 (ttc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_17
TPR_8
TPR_9
TPR_16
TPR_14
TPR_12
TPR_19
TPR_CcmH_CycH
ARM_TT21_N
PPTA
SHNi-TPR
TPR_10
Motif
Other DBs
NCBI-GeneID:
115146769
NCBI-ProteinID:
XP_029544680
LinkDB
All DBs
Position
LG18:20727676..20756419
Genome browser
AA seq
1845 aa
AA seq
DB search
MEEATERPCGTSDTPQNRTSQMSAGSVSLLEFHADLLQSPPASLPQSALLLHIPKTKSEV
SRSQGTTRIKGISEGRNSVHLVLSSPGQKPSQKPAIAQLAGTTKVVSMSMRPQPPSKPRS
ERPATGTRMFIYKSKKESEQVSEKEAAERRIRRSNFFSRCLALSSDNTDDSRNSEDSGSE
PSHGKAPQKVKKKKRRNQKDRSTHAPRTPADDRSSKSQRSTMAPNSIHSVKSTTELLEEA
RGIVGAEVAESQEDTDPQQRHPEESVATTMGLVRGRGRTVDEIIASLQRGDSDMPSASDQ
MIKELMERVLGDSYNADNEDTPQRSPVPQRMLWVKRDSPTPPRPAESPKVTSGVYKIAHS
LSERETDGDDSMVSALPQKTSADGYKTIHHLCTTPVSQALPLELQLASRVCHTSSQLSAP
PQFHQQRAALQHRHRILNEGVPRVEVTESDGKDCVSHLPSQTSDSLADWQRIAEFYVEKP
RMMLHGQATSLCSNELKMFWHPAPPKFSCSPAFVKHKLFPKYQATWNDLSREELYGDLQD
LVESACDLTEMEPTTSVENVLSRKFKSMIDLRVTEQSPQPSIDKEQLKRPFSAPHLNPEP
EAFLKVSCDFATVTRELEVVRQQLSSTVLAEETHPQVTPTVQQEADHQAPAAGPNTEELT
PALSQSQLQYRRDRGRVMMAEPVRGGSISHSKRKVAKGGKKLCPAKLAYIHEKLQESPRT
LIRSESVCQLLPIKPTTCLSEEPPLPLPLPRYPSLPLVLDFESFAADQGGIPDVLPPREW
VRDIWDAWFDQLFPPLEESSSTSKKESDSSKRAPSSSLQSGALKKPGEKVLMLDEIQPLD
WVDLSLTLDQGLTTGDLEGEVAKLTQAIAQQDRPSAFDLCRRGALQKKLGRLNQALEDLN
ATISLEPYLLDAYWHRHSIYLLRNNQNSALDDLNFIIKHTKKHADAFKSKAEIYRVRGET
TLAIINYTQAIKCRPEDDDNYFKRAEMYEKRNEILLAMEDYAKTFTINPGRTDALLTHGL
QYFHSCNWMVALSDFTLLLQRDPSHAIARTYRGRIYAKVGQYQEAIEDFSLAVHLDPNDW
QAFYHRGCLLRKRMPDISLQDLSTSVLINDSQENLSAFLHRGLLYTERRQWQQAVFDFEA
VIKLDRSVALAHVNLGLIFMLNMGQNYEAIRMFSNALRVDPTYIRGYICRAQAYRNVNDL
KRALKDLTRATHMKPDAQQLYIMRGQYLCDMEQFDLATFCIQYAAEMNKALGSSPIQQAA
VQSFLGNDAKAIACLEAASNNRPSPPILILLGKTQMKARKFMEAVESFRKSLILLSPNET
NLYNVSEAAEVFYLTGLCYMALALLLQAFDAFSNAVKINPDYADAYHQRGLCRMRLQQSK
SVQDFNRALFINPNLFQVYLSRAAFYGAKGRYSKAILNCNEAIKIQPKSVRVYLYRGALK
FYLKVYKGAVEDLTMALRIDKTCSFAHYNRGVCYQQLEEYELALRDYGIVLLLPSKKEID
LKVLINRALLYVELSDHHNALQDFKAASLRSPEDATIYHALGVYHHRLGQLQESVEAYSQ
AMQISPFFLDAYVGRGNACMDYGHTQATKQAQRDFLSALHLNPLCSNARICLAYNFQVFG
FFQRAWNQFTVAAEIDSKCWKAFEGRAVINLQMGNTYAAFQDINMALKHHPVSDQLLTNR
GVINQFMGDKANAMKDYQRAISLNPKYALAFFNAANLYFYNRQFEQACEHYSQAFELDPE
DESAVLNRAITRALLRKVPEALQDFSEALRLNPYSSHVFFNRANLYSSLRQYRNAEKDLS
HALLLQPNDALVYKLRADVRGHLGLTDQAMQDYRTAVELQEALEG
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggctacagagagaccctgtggcacatcggacacgccccaaaataggacctca
cagatgtctgcagggtcagtcagcctgttggagttccatgcagatctgctacaatcacca
cctgcctccttaccacaaagtgctctcctactacacatccctaaaacaaagtctgaggtg
agcaggagtcaaggaaccacacgtatcaaaggaatcagtgaagggagaaattcagttcat
ttggtcctgtcttctccaggccagaaaccttcccagaagccggccatagctcagctagca
gggactaccaaagtggtgtccatgtccatgaggccacagcctccctctaagcccaggtca
gagaggccagcaacagggactaggatgtttatatacaagagcaagaaggagtcagagcag
gtgtcggagaaggaagcggcagagaggcgcatccggagatccaacttcttcagcagatgt
ctggctctgagctcggacaacaccgatgacagcaggaacagtgaggactcgggctccgag
ccatcccacgggaaagccccacagaaggtcaagaaaaagaaaaggaggaatcagaaagat
aggtctacgcatgcaccaaggacgcccgctgacgacagaagctcaaagagccagaggagt
accatggcccctaacagtatccacagtgtcaagtccaccacagagctgctggaggaggca
cggggcattgtaggggccgaggttgcagagagccaggaggacacggacccccagcagaga
cacccagaggagtcagtggccacgactatggggcttgtcagaggcagagggaggacggtg
gatgagatcattgcctccttacagagaggggacagtgatatgccatctgcctcggaccag
atgatcaaggagctgatggaaagagtgctgggggacagctacaatgctgacaacgaggat
actcctcagaggtccccggttccacagaggatgttgtgggttaagagggattctcctacc
cctccaagacccgccgagtcccctaaagtcacatcaggggtctacaagatcgctcactca
ctgtctgaacgagagacagacggcgatgactctatggtctctgctcttccacagaagact
agtgcagatgggtacaagaccattcaccacctctgtacaaccccagtcagccaggccctg
cctctggagctgcagctggcttcccgggtctgtcacacctccagccaactcagtgcacca
ccacagtttcaccaacagagggcagcactacaacacagacacaggatattaaatgaaggc
gtgccccgcgtggaggtgactgagtctgatggaaaggactgtgtgagtcacctgccttcc
cagacttcagacagcctggctgactggcagaggatcgctgagttttacgtggagaagccc
aggatgatgcttcatggacaggcgacctctctgtgttccaacgagctgaagatgttctgg
cacccagcgcctcctaagttcagctgctctcctgcattcgtcaaacacaaactctttccc
aagtaccaggcaacgtggaacgatctctccagagaggagctctatggtgatctacaggac
ctggtggaatcagcctgtgacctgacagagatggagccaaccacctcagtggaaaatgtg
ctgtccagaaagttcaagtctatgatagaccttagagtaactgagcagtcacctcaaccc
tccattgacaaagaacagttgaagaggcccttctctgccccacacctcaaccctgagcca
gaggccttcctcaaggtatcatgtgactttgccaccgtcaccagagagctggaggtggtt
cggcagcagctgtcctccactgtgctggctgaggagacccatccccaggttactcccact
gtccagcaggaggccgaccaccaagcccccgcagcaggccccaacacagaggagcttacc
ccagccctcagccagagtcaactccagtacaggagggaccgaggcagggtgatgatggcg
gaacccgtcaggggaggcagcatatcccactcgaagaggaaggtcgccaagggtgggaag
aagctgtgccctgccaagctggcctacatccacgaaaaactgcaggagtcaccacgtact
ctcatcaggagtgagtctgtgtgccagctactacccatcaaacccaccacgtgcctttca
gaggagcctcccctccctctccccttgcctcgctacccgagcctacccctggtgctggac
tttgagagctttgccgctgaccagggtggcatccccgacgtactccctccccgggagtgg
gtgagggatatctgggatgcctggtttgaccagctcttccccccactggaggagagcagc
agcacctccaagaaagagtcagactcctctaagagggcccccagcagcagcctccagagc
ggggccctgaagaagcctggggagaaggtcctgatgctggatgagatacagcctctggac
tgggtggacctgtctctgaccctggatcagggactgaccacaggcgacctggagggagag
gtggccaagctgacccaggctattgcccagcaggacagacccagcgcctttgacctgtgt
cgcaggggggcgctgcagaagaaactgggccggcttaaccaggctctggaggatctcaat
gccaccatttccctagagccctacctgctggatgcttactggcacaggcacagcatttat
ctgctcagaaacaaccagaatagtgctttggatgacctgaactttatcatcaagcacacc
aagaaacatgcagatgccttcaagtccaaagcagaaatctacagagtgagaggagagacc
accctggctattataaactacactcaggccatcaaatgcagacctgaagacgatgacaac
tatttcaagagggcggagatgtacgagaagaggaatgagattctactggccatggaggac
tatgccaaaacgttcaccatcaacccagggagaacggatgctctgttgacccacggcctg
cagtacttccacagctgtaactggatggtggctctgtctgactttactctgctgctccag
cgtgatcccagccatgccatcgccaggacgtacaggggcaggatctatgctaaggtgggt
cagtaccaggaagccatcgaggacttctccctagcagttcacctggaccccaatgactgg
caggccttctaccaccggggctgtctgctcaggaagaggatgcctgatatttccctccaa
gacctcagcacctcagtactcattaatgatagccaagagaacctgagtgccttcctgcac
aggggcctgctctatacggagcgacggcagtggcaacaagccgtgttcgactttgaagct
gtgatcaaacttgacaggtctgtagcgctggcccatgtgaacctgggcttgatcttcatg
ttgaatatgggccagaactatgaagccatccgaatgttcagcaacgctttgagggtggac
cccacctacatcagaggatacatctgccgtgcccaagcctatcgcaatgtcaatgatctg
aagagagcgctgaaagatctgacacgagccacgcatatgaaaccagacgctcaacaattg
tatatcatgaggggccagtatttgtgtgacatggaacagtttgacctggccacgttctgt
atccagtatgctgcagagatgaacaaagcactagggtcatctcccatccagcaggctgct
gtccagtctttcctggggaatgatgccaaagccattgcctgtctggaggcagcctccaac
aaccgaccttcacctcccatcctcattctcctgggcaagacacagatgaaggcacgcaag
ttcatggaggcagtagagagcttcaggaaatccctgattctgctgagccccaacgaaacc
aacctgtacaacgtctctgaagctgcagaggtcttctatctgactggactctgctacatg
gcactggctctcctgttgcaggcttttgatgcgttcagcaacgcagtgaagattaaccct
gactatgcagatgcgtaccaccagcgtgggctctgtcgtatgcgcctgcagcagtccaag
agtgttcaggacttcaacagagccctcttcatcaaccccaacctgttccaggtgtatctg
agccgtgcagccttctatggtgctaaagggcgctattcaaaggccatcctgaactgcaac
gaagccattaagatccagcccaagagtgtcagagtctacctgtatagaggagcactcaaa
ttctacctgaaggtgtacaaaggggccgtggaggacctgaccatggccctgaggatagac
aaaacctgctcatttgcacactacaaccgtggagtgtgttatcagcaactcgaggaatat
gaattggctcttagagactatgggattgtcctcctccttcccagcaagaaggagattgac
ctgaaggtcttgatcaatcgtgcccttctctacgtggagctgagtgaccatcacaatgcc
ttacaggatttcaaagctgcctccttgagaagtccagaggacgccaccatctaccatgcc
ctaggagtctaccatcacaggctgggtcagctccaggagtcagtagaagcctacagccag
gccatgcagatcagcccgttcttcctagatgcctacgtggggcggggcaatgcctgcatg
gactacggccacacccaggctaccaaacaagctcagagggacttcctttcggccctgcac
ctcaaccccctctgctccaacgcacgcatctgcctggcctacaacttccaggttttcggt
ttcttccaaagagcctggaaccagttcacagtggcagcagagattgactccaaatgctgg
aaggcatttgaggggagagctgtcatcaacctgcagatgggaaacacctatgctgctttc
caagacattaacatggctctgaagcaccatcctgtgtcagatcagctgctgactaaccga
ggggtgatcaaccagttcatgggggacaaagccaatgccatgaaagactaccagagagcc
atctcactcaaccccaagtatgccctggccttcttcaatgctgctaacctctacttctac
aacaggcagtttgaacaggcctgtgagcactacagccaagcatttgagctggacccagag
gatgaatctgcggtgctgaaccgggccatcaccagggctctgctgaggaaggttccagag
gccctccaggacttctctgaggccctgagactcaacccttattcttcacacgtgttcttc
aaccgagccaatctctacagctccctgcgccagtacaggaatgcagagaaggacctcagt
cacgctcttctcctccagcccaacgatgccctggtctacaagctccgtgctgatgtcaga
ggccacctgggcttgactgaccaagcgatgcaggattatagaacagcagtggaactccaa
gaggcactggagggctga
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