Oncorhynchus nerka (sockeye salmon): 115146988
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Entry
115146988 CDS
T07952
Name
(RefSeq) homeobox protein orthopedia B-like isoform X1
KO
K24901
homeobox protein orthopedia
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115146988
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115146988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Harakiri
Motif
Other DBs
NCBI-GeneID:
115146988
NCBI-ProteinID:
XP_029544836
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All DBs
Position
LG19:complement(7174457..7180079)
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AA seq
341 aa
AA seq
DB search
MLSHADLLDARLGELSSPNSGLQLYWMKDAAAELLGHREALKCRLGGGVGSDPGHSGELA
PGPDTVEGATMLPGDDINNGGSNPSGMQVNSKEQQDKQQQNNSSQSGGSQSQKQKRHRTR
FTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVTESRVQVWFQNRRAKWKKRK
KTTNVFRNPGTLLPTHHGLHSQFNSAAAAAAAMGDSLCSFHANDTRWATAGMPGVSQLQL
PPALGRQHQHAMAQSLSQCSLSGPPPNSMGLSNMSSNGSGLQSHLYQNPFPGMVPASLSG
PTNVTGSPQLCSSPENDVWRGTSIASLRRKALEHTVSMSFT
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgctatcgcacgccgacctcctggatgctcgcctcggtgagttatcatcgccaaactcc
ggtcttcaactctactggatgaaggatgccgcggcggagctactgggtcacagggaggct
ctaaagtgcagactaggcggtggagtgggatctgaccccggccactccggcgagctagcc
ccggggccagacaccgtggagggggctaccatgctccctggagacgatatcaacaacgga
ggatccaacccttccggcatgcaggtcaacagtaaagagcaacaggacaagcaacagcag
aataactccagccaatccggaggaagtcagagtcagaaacagaagcgccaccggacccgg
ttcaccccggcccaacttaacgaactggagcgcagcttcgccaaaacgcactacccagac
atcttcatgagggaggaactggcactacggatcggcctaacggaatctcgcgtgcaggta
acggaatctcgcgtgcaggtttggttccagaaccgacgtgccaagtggaagaagcgcaag
aagactaccaacgtttttcgcaacccggggacgctgctgcccacccaccacggcctgcac
agccagttcaactctgccgctgccgccgccgcggccatgggcgacagcctatgctccttc
cacgccaacgacacacgatgggctacggcagggatgccaggcgtctctcagctgcagctc
cctccagccctgggtcgccagcaccagcatgccatggcgcagtccctgtcccagtgtagc
ctgtccggtccgccgcccaactccatggggctatccaacatgtcgtcgaacggatccggg
ctccagtctcacctctaccagaacccgttccctgggatggtcccggcctccttgtccggt
cccaccaacgtgacgggctcgccccagctgtgtagctccccagaaaatgacgtctggaga
gggacgagcatcgcctccctgcggcgcaaagcgctggagcacacagtatccatgagtttc
acttag
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