Oncorhynchus nerka (sockeye salmon): 115146999
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Entry
115146999 CDS
T07952
Symbol
ptcd2
Name
(RefSeq) pentatricopeptide repeat-containing protein 2, mitochondrial isoform X1
KO
K17711
pentatricopeptide repeat domain-containing protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
one03029
]
115146999 (ptcd2)
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
115146999 (ptcd2)
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
MRP-S27
PPR
DUF4946
Motif
Other DBs
NCBI-GeneID:
115146999
NCBI-ProteinID:
XP_029544847
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Position
LG19:11566331..11570471
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AA seq
383 aa
AA seq
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MALGRISVCFRVLLHDIPSKGLCRGLIQSDCMTCRVGAKRHLLSEDVVKLQEFQQRKLAV
AHQVSGSKSHYIEVFNQKLMKKQLVLKDELKLLLHLCQSAEDMVTARGAIYRYHEENRNV
AFGEFKFGPLFMRLCYELGLEEMAAATLTDKDLRGFFSDSTSFNIAIDMLFMKGLYESGL
DVLRDMKNQGVPFNKDTFTLATGTCYKLNTPESYRICTALMEEGQTKGHMIPRHAYCFTV
ALALRQNDVEKAQSMFGQIMSTDSRICQNLKVLILAMAGAVKESLFILTLALGSSTTVFI
KKPEFAQEVVDLVRLRSEDSPLMAGVEEAVSRLQNAGQVTQRSLDEMLCHTPTGKRRMPI
GMMEERLISRRTLRPLQSTLLSE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttggaagaatcagcgtctgcttccgagtactgcttcatgatattccctcaaag
ggattatgtcgtggcctcatacaatcggactgtatgacatgcagggtaggagcaaaaagg
catctgctgtcagaggatgttgtcaagctacaagaatttcagcagcggaaactggcagtg
gctcatcaagtgtccggatcaaaaagtcattatattgaggtatttaatcaaaagctgatg
aagaaacagctagtattgaaggatgagttaaagctgcttctacacctttgccaatctgca
gaggacatggtcacagccagaggtgccatctacaggtaccatgaggagaacagaaacgta
gcatttggagagtttaagtttggtcctctcttcatgaggctgtgctatgaactggggctg
gaggagatggctgctgccacactgacagacaaggatttgagaggattcttctcggactca
acctccttcaatattgccatagacatgctgtttatgaaaggattatatgagagtggtctg
gatgtattgcgagacatgaagaaccaaggtgtgccattcaacaaggacacgttcacatta
gcaactggtacttgctataaactgaacactccagagtcctatagaatctgtactgccctg
atggaggagggacagaccaaaggacacatgatacccaggcacgcctactgcttcactgtg
gcgctagcacttagacagaatgatgttgaaaaagcacaatccatgtttggtcagattatg
agcactgacagcagaatatgccaaaatctcaaagttctgatactggctatggcaggagct
gtaaaagaatccctcttcatcctgaccctagccttgggttctagcaccactgtctttatc
aagaagcctgaatttgcacaggaagtggtggacctggtgcgtttgcggagtgaggacagt
cctttgatggcgggtgtggaggaggcagtgtcccgtctccaaaatgctggtcaggtgaca
caacggagcctggacgaaatgttgtgtcacacccccacggggaagaggaggatgcccata
ggaatgatggaggagagattgatcagccggaggactctgaggcccctgcagtccactctg
ctctcagagtga
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