Oncorhynchus nerka (sockeye salmon): 115147009
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Entry
115147009 CDS
T07952
Name
(RefSeq) nodal homolog 2-A-like
KO
K04666
nodal
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04060
Cytokine-cytokine receptor interaction
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115147009
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115147009
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
one04052
]
115147009
Cytokines and neuropeptides [BR:
one04052
]
Cytokines
Transforming growth factors (RSTK binding)
115147009
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
115147009
NCBI-ProteinID:
XP_029544859
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Position
LG19:complement(15823444..15826123)
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AA seq
417 aa
AA seq
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MEGLTLAFFLALLMDSICVVGAENFPGNREAFFHGIRRFPPPSGGHRHPVRHSNRFPLYM
MQLYRTLLEGDTARTPTFSAARTNNDDNPRLHDSDYVLSLVAKSCHQIGGRWSVTFDMSS
ISASDKVQRSELRIRLPAFSASKRVTVDMYHSQRCSYSSPPCPKESLFLGHLKAEPSSLT
STSNWRVFNVTALLHYYWLHQSGSAPGQEVRRPVEREEEEGQERVLHPTADRVMVVVFSK
HQAEKRAPTLIHTAEHSKYVTLDWERARAGADPAASVEVEGGKGTSRRKRHGYHQRAGVA
GVAPGVAPMKERKDPLCRKVDMWVDFDQIGWNEWIVYPKRYNAYRCEGSCPTPVDETFTP
TNHAYMQSLLKLHHPDRVPCPFCVPTRLAPLSMLYYENSEVETRHFEGMVVEECGCH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaaggactcactctggctttcttcttggcgcttctgatggactcgatctgtgtggtt
ggagcagagaatttcccaggaaaccgtgaggctttcttccacgggattcgtaggtttccc
ccgccaagcggaggtcacaggcaccctgttcgtcactcgaacaggttcccactctacatg
atgcagctctaccggactctactcgagggagacaccgccaggacgccaacttttagcgcc
gcccggaccaacaacgatgacaacccccgccttcacgactctgactacgtactcagtctg
gttgccaaaagttgtcaccagatcggtgggaggtggtctgtcacctttgacatgtcctcc
atctctgcaagtgacaaggtccagcgctccgagctgcggatccgcctgcctgcattctct
gcctctaagcgtgtcactgtggacatgtaccactcccagagatgctcctactccagcccg
ccatgcccaaaggagagcctcttcctgggccacctgaaggcagagccaagctctctgacc
tccacatccaactggagggtgttcaacgtcaccgccctgctccactactactggctgcac
cagagtggctccgcacctggccaggaagtgcgcaggccagtggagagagaggaggaggag
ggacaagagagggtcctgcaccccacagccgaccgggtcatggtggtggtcttctccaag
caccaggcagagaagcgggctcccaccctcatccacaccgctgagcactccaagtacgtc
actctggactgggagcgagctagagctggggccgaccctgctgccagcgtagaggtagag
ggcggaaaaggaaccagtcgcaggaaaaggcatgggtaccaccagagagcaggagtggct
ggggtggcccctggtgtggcccccatgaaggagaggaaggacccattgtgcaggaaggtg
gacatgtgggtggactttgaccagattggctggaacgagtggattgtttaccccaagcgc
tacaatgcctaccgctgtgagggcagctgccctaccccagtggacgagaccttcaccccc
accaaccatgcttacatgcagagtctgctgaaacttcaccacccagacagggtcccatgc
ccgttctgtgtgcccacccgcctggcccctctctccatgctgtactacgagaacagtgag
gtggagacgcggcactttgagggtatggtggtggaggagtgtggttgccactga
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