Oncorhynchus nerka (sockeye salmon): 115147018
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Entry
115147018 CDS
T07952
Name
(RefSeq) transmembrane channel-like protein 2-A
KO
K21988
transmembrane channel-like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
115147018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115147018
03037 Cilium and associated proteins [BR:
one03037
]
115147018
Transporters [BR:
one02000
]
Other transporters
Pores ion channels [TC:
1
]
115147018
Cilium and associated proteins [BR:
one03037
]
Other cilia and associated proteins
Stereociliary proteins
115147018
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
Strabismus
Motif
Other DBs
NCBI-GeneID:
115147018
NCBI-ProteinID:
XP_029544868
LinkDB
All DBs
Position
LG19:16436344..16444593
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AA seq
958 aa
AA seq
DB search
MPRKSDVAAKIEDVGIEIDGDVSDSEDDTSRRRGNRRPAAGRGGARGRGKKPADEDDEDE
EEEEAPRNRRGANKKKAAKSRDTDDESEDDTPKRRQGRAANKGAANKKKGGKAQDNDEDS
EEEKGNKRNKKGATGKKGKEEETKDKKGDAKGKGKGKEKEDEKDKKKKKKKESSSDTDSN
TDSEEESMSEGEMERLKEEVEEKKKVIAIMRNKPWRMKRRLVHLKECQEFVDKFEGALGK
GKGRKFYAYKVMMTKKWIKFQRDFENFKTTCIPWERKIKEVESHFGSSVASYFIFLRWMY
GMNMVLFGLTFGLVVIPEVLMGLPYGSIPRKTVPRAEQPTAQDYSVLMDFNGYCKYSVLF
YGYYNNQRTIGLLKFRLPLSYLMVGVGTFGYSLMVVIRTMAKNADVGGGDGDDGEFTFAW
KMFTSWDYLIGNAETADNKYASITTSFKESIVDEQENQKDENIHLRRFLRVLANFMIICC
LGGSGYLIFFVVKRSQEFANRDDLSWYEKNELELIMSLLGLVCPPLFETIAELEEYHPRI
ALKWQLGRIFALFLGNLYTFLFALFDEVNNKLDEEVSIRNASIWAQKEYYANFTLYNNDT
DTTPPPMDPSDVIRGPCWETAVGIEFVKLTVSDIQVTYLTILIGDFARAVIVRFLNYCWC
WDLEATYPSYGEFDISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLLSSMYYQCWAVMA
TNVPHERVFKASKSNNFYMGLLLLILFLSLLPVVYTIMTLPPSFDCGPFSGKAKMFDVIM
ETIDLDLPAFLGTLMGYAANPGLIIPAVLLMVLAIYYLNSVSEAYQHANAELKKKMQMAR
DEEKNRRNNTESTDQVMKDLEDLLPNRSLLPPAPPPETGADNKADQGGKSTKVRPGTAGK
DVNLQKDVSLSSPNPNARGAVTRPPGPRGPGPLPGNGQQGPGGGPGRGRGRGQPPPRR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggaagagtgatgtggcggcgaagattgaggatgttggaatcgagatcgatggg
gacgtgagtgacagtgaggatgacaccagtcgaaggagagggaacagaagaccggcagct
ggcagaggaggagcccgcggcaggggcaaaaagccagctgatgaggatgatgaggacgag
gaggaagaggaggcccccagaaaccgcagaggagccaacaagaagaaggctgctaagtca
cgtgacaccgacgacgaaagtgaggatgacacccccaagagaagacaaggaagagcagca
aataaaggagcagcaaacaaaaagaaaggaggaaaggcccaggacaatgacgaggacagc
gaggaggagaaggggaacaagagaaacaagaagggagccacgggaaagaaggggaaagaa
gaggagaccaaagataagaaaggagatgccaaagggaagggcaaaggaaaggagaaggaa
gacgagaaggacaagaagaagaagaagaagaaagagagcagctcagacacagactctaac
acagactcagaggaagagtccatgtcagagggagagatggaacgactgaaggaggaggtg
gaggagaagaagaaggtcatagctattatgaggaacaagccctggcgaatgaagaggagg
ctggtacatctgaaagaatgtcaagaatttgtggataaatttgaaggggctctgggaaaa
ggaaaaggcaggaagttttatgcttataaagtcatgatgacgaagaaatggatcaaattc
caaagagattttgaaaatttcaaaacgacttgcataccatgggaacgaaagataaaagag
gttgaaagtcactttgggtcctcagttgcttcctacttcatcttcctgcgctggatgtat
ggcatgaacatggtcctctttggcttaaccttcggactggttgtgatcccagaggttctg
atgggacttccgtatggatccattcccagaaagacagtgcccagagctgagcagcccact
gctcaagactactctgtcctcatggacttcaacgggtattgcaaatactcagtcctcttc
tatggttactacaacaaccagaggaccattgggctgctgaagttccgcctcccgctgtct
tacctcatggtaggagtggggacttttggctacagcctgatggtggtgatacgaacaatg
gctaagaatgctgacgtggggggaggggacggagatgacggggagttcacctttgcctgg
aagatgttcaccagctgggattacctcatcggcaacgccgagacggctgacaacaagtac
gcctccatcaccaccagcttcaaggagtccatcgtggatgagcaggagaaccaaaaagat
gagaacatccacctgaggaggttcctgcgtgtgctggccaacttcatgatcatctgctgc
ctgggaggaagtggctacctcatcttctttgtggtgaagaggtcccaggaatttgccaac
agggacgacctgagctggtacgagaaaaacgagttggagctcatcatgtccctgttgggc
ctggtgtgtcctcccctgtttgagaccatcgctgagctggaggagtaccacccccggatc
gccctcaaatggcagctggggcgcatctttgccctttttttgggaaacctctacactttc
ctgtttgccctgtttgatgaggtcaacaacaagcttgatgaggaggtgtccattaggaat
gcgtccatctgggcccagaaggaatactacgctaacttcaccctctacaacaatgacacg
gacaccaccccgccccccatggacccttctgacgtcatcagggggccatgctgggagacc
gccgtcggcatagagtttgtgaagctgaccgtgtcagacatccaggtgacctacttgacc
atcctgattggtgactttgcgcgggctgtcattgtcaggttcctcaactactgctggtgc
tgggacctcgaagccacatatccatcgtatggagagtttgacatcagtggcaacgttctt
ggtctggtcttcaaccaaggaatgatctggatgggtgcattctatgctccagggctggta
gggataaacgtcctgcgtctcctctcctccatgtactaccagtgctgggccgtaatggcc
actaacgtgccccatgagagggtcttcaaagcctccaaatccaacaacttctacatgggc
ctcctccttctcatcctctttctcagtctactgcctgtggtctacaccatcatgactttg
ccaccctcctttgactgtgggccattcagtgggaaggccaagatgtttgatgtcatcatg
gagacgatagacctggacctgcctgcctttctgggaacactgatgggctacgcagccaac
cctggcctcattataccagctgtgctactgatggtactggctatctactatttgaactcg
gtatctgaggcgtaccaacatgccaatgcggagctgaagaagaagatgcagatggcaaga
gatgaggagaagaacaggaggaacaacactgaaagcacagaccaggtcatgaaggacctg
gaggacctgctccccaaccgttctctcttgcccccagctcccccaccagagacaggtgca
gacaataaagcagaccaaggtggaaagtctacaaaggtgaggccaggaactgcaggcaag
gatgtgaacctgcagaaagacgtgtccctgtcatcaccaaatcccaacgctcgaggcgca
gtgacccgcccaccgggtccccgggggcctggacctctgcctggaaatggtcagcagggg
ccaggagggggaccagggcggggacgggggagaggacagccacctccaaggcgctag
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