Oncorhynchus nerka (sockeye salmon): 115147092
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Entry
115147092 CDS
T07952
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
one03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115147092
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115147092
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115147092
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115147092
03036 Chromosome and associated proteins [BR:
one03036
]
115147092
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115147092
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115147092
SWI/SNF complex
115147092
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115147092
PBAF complex
115147092
SWI/SNF complex
115147092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
115147092
NCBI-ProteinID:
XP_029544946
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All DBs
Position
LG19:97672..123184
Genome browser
AA seq
281 aa
AA seq
DB search
MVSGVRDNQQPDDLEAGEREYREQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRD
KKRTFPLCFGDHDPAVIHENASQAEVLVCLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEI
LCDDLDLNPLAFVPAIASAIRQQIESYPTDSILDEQTDQRVIIKLNIHVGNISLVDMSER
ENSPETFGLMLCSELGLGGEFVTTIAYSIRGQLSWHQRTYAFRADFSENPLPKVEIAIRN
TGDAWCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcaggtgtgcgggataatcagcagcctgatgacctagaggccggagaaagggag
tatagggagcagaaggcaaagaggaacagccagtgggtccccacgctgcccaacagctcc
caccacctggatgctgtgccctgctccaccaccatcaatcgcaaccgaatgggccgcgac
aagaagaggaccttccccctgtgctttggcgaccacgacccggcggtgatccacgagaat
gcgtctcaggccgaggtgttggtttgtctggacatggagattgacgggcagaagctccga
gatgccttcacctggaacatgaatgagaagctgatgaccccagagatgtttgctgagatc
ctgtgtgacgacctggacctgaaccccctggcctttgtcccggccatcgcctcagctatc
cgccagcagatagagtcctaccccacagacagcatcctggatgaacagaccgaccagagg
gtcatcatcaagctgaacatccacgtggggaacatctccctggtggacatgtcggagagg
gagaactctccggagacgtttggcctgatgctgtgctccgagctgggcctgggaggagag
tttgttactaccattgcctacagcatccgcggccagctcagctggcaccagaggacgtac
gccttcagggctgatttcagtgagaaccccctgccaaaggtggagattgccatccgcaac
acaggtgacgcatggtgccctctgctggagaccctgacagatgcagagatggagaagaag
atcagggaccaggacaggaacaccaggcgcatgagacgacttgccaacactgcccccgcc
tggtag
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integrated database retrieval system
