Oncorhynchus nerka (sockeye salmon): 115147096
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Entry
115147096 CDS
T07952
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115147096 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115147096 (prpf31)
Spliceosome [BR:
one03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
115147096 (prpf31)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
115147096
NCBI-ProteinID:
XP_029544960
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Position
LG3:complement(677375..682151)
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AA seq
529 aa
AA seq
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MSLADELLADLEEAGDEGEDGLYPGEEGESDGEGQVEGGLEDIPEEMEVDYSGAESVSSI
AKLRNSKQFSEIMDKIAIYVEKQRKNSEVSGPVEADPEYKLIVAANNLTVEIENELNIIH
KFVRDKYSKRFPELESLVPNSLDYVRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTA
STTQGTMLGEDELKRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSVIVGASTAAKI
MGIAGGLTNLSKMPACNLMLLGTQKRTLSGFSSTAVLPHTGYIYHCDVVQTLPPDLRRKA
ARLVSAKCTLASRVDSFHESADGKVGYDLKEEIEKKFDKWQEPPPVKTVKPLPAPLDGQR
KKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVRQAQ
VNEATKARISKSLQRKLQKQNMTYGGRSTVGGRSTVGSRSTVGGRSTVGGRSSVRDNSSG
TSSSVAFTPLQGLEIVNPHAAEKKVAEANQKYFSNMAEFLKVKKEGEGK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggccgatgagctcctggctgatctggaggaggcgggggatgagggggaggat
gggctgtacccgggggaagagggggagagtgatggggagggacaggtagagggaggtttg
gaggacattccagaggagatggaggtggactacagcggagctgagagtgtctcgtccatc
gctaaactacgcaacagcaaacagttctcagagatcatggacaaaattgcaatctatgtc
gagaagcagcgcaagaactctgaagtctccggtccggtggaggcagacccagaatacaag
ctcatcgttgctgccaataacctcacagtagaaattgagaacgaactgaacatcattcac
aagtttgtacgtgacaagtattctaagaggttccctgagttggagtccctggtgcccaac
tctctggattacgtccgcactgtcaaggagctggggaacaacctggacaagtgtaagaac
aacgagaatctgcagcagatcctgaccaacgccaccatcatggtggtcagcgtcacagcc
tccaccacacaggggacgatgctgggtgaggatgaactgaagaggttggaggaggcctgt
gacatggcgctagagctgaaccaatcaaaacacaggatctatgaatatgtggagtccagg
atgtcgttcattgctcctaatctgtcagtcatcgttggagcctcgaccgcagccaagatc
atgggtattgctgggggcctgaccaacctgtctaagatgccagcctgtaacctgatgcta
ctgggaacccagaagaggaccctgtccgggttcagcagcaccgctgtgctcccacacacc
ggctacatctaccactgtgatgtggtccagactctacccccggacctgaggagaaaggca
gcacgcctggtttcagctaagtgcaccctggcatcccgagtggacagcttccacgagagt
gcagacggcaaggtgggctatgacctgaaagaggagattgagaagaagtttgataaatgg
caggagcctccaccagtgaagactgtcaaacccctgccagcaccgttggacggacagagg
aagaagagaggagggcggaggtatcgtaagatgaaggagcgtctgggtctgacagagatc
aggaaacacgccaacaggatgaccttcgcagagattgaggatgatgcgtaccaggaggac
ctgggtttcagtctgggccagctggggaagtcgggcagtggacgcgtcagacaggctcag
gtcaacgaggccaccaaggccaggatatccaagtccctacagaggaagctgcagaagcag
aacatgacgtacggcggcaggtccacagttggcggcaggtccacagttggcagcaggtcc
acagtcggcgggaggtccacagttggcgggaggtcctcggtcagagacaactcctcagga
acaagttccagcgtagccttcactccactacagggactggagatcgtgaacccgcatgca
gcagagaagaaggtggctgaggccaaccagaaatacttctccaacatggcagagttcctc
aaggtcaagaaggagggagaaggaaagtga
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