Oncorhynchus nerka (sockeye salmon): 115147133
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Entry
115147133 CDS
T07952
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115147133
03037 Cilium and associated proteins [BR:
one03037
]
115147133
Transporters [BR:
one02000
]
Other transporters
Pores ion channels [TC:
1
]
115147133
Cilium and associated proteins [BR:
one03037
]
Other cilia and associated proteins
Stereociliary proteins
115147133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
115147133
NCBI-ProteinID:
XP_029545026
LinkDB
All DBs
Position
LG3:complement(712494..723005)
Genome browser
AA seq
698 aa
AA seq
DB search
MEFSELQRPSSTIAHSYHGAQQLVRLRSKSVVSNQNGPQFNWGSPPSEGGEEGDSGPPKD
LRERPMTMRLKRAIREVQQMRVPVVTTWQSWKRSKAKSLSRFRTDAGGVMSYVALWRKAL
HKIGGHFGGGVQSYFIFLRFLVVLNFLSFLLIAGFILIPSIVFRSTSTSNMTVDSTGPEV
CKVYDPNLQGLVVFYQYFLDLLSGTGFMEYSYMFYGYYNNTVAESSGFHYNLPLAYLLTS
VFYFAFCLICIIARMGSALRVAVATGSGAAGSYSKMVFTGWDYGCQGDRATKLKQKSIHY
QLQVDLEEERLQKKALSLTLGQTVGLCSLRIFLMLVSLALIGGAFFGIFKATVFSQVQVG
AEGILGLFWVYLPSIVITTGNFVVPFMCDQIALFERYSPSTTIIMALFRSVFLRMISLGV
LLFTLWSQITCFKDSPKCELCQYNNKEYPCWETRVGQEMYKLALFDFLITIAMLILVEFP
RRLFVDHYSCVLTRWVGRQEFLVPPNVLGLVYGQTVVWTGALFCPLLPLINTLKFFILFY
CKKVTLFSNCRPAVKTFRSTTSTIFFLVVLLFGWGLALVAMIYSLAQIHPSMSCGPFRSL
TMMWSIVPNTFYTLSLTTQDFIFYMGSQAFSIPLFIFSCVVLCYVAALAAVYGKSVDLLK
AQLKLEGRDKQFLVKQIEELSREMGVPTRDQLDTGAAN
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggagttcagtgagctacaaagaccgagctccactatagcccacagttaccatggtgcc
cagcagttggtgaggttacggagtaagtctgtagtgtccaatcagaatggccctcagttc
aactggggttctcccccctcggaggggggagaggagggtgactcgggaccccctaaggac
ctcagagagcggcctatgaccatgcgtctgaagagagcgatacgggaggtgcaacagatg
cgtgtgcctgtggtgactacctggcagtcgtggaaaaggagcaaggccaagtccctgagc
aggttcagaacagatgcagggggagtcatgtcctacgtagctctgtggagaaaggctctg
cataagataggaggccactttggcggtggtgtccagtcctacttcatattcctgcgcttc
ctggtggtgctcaacttcctgtcgttcttgctgattgctgggttcatcctcatccccagt
atcgtgttcagatccaccagcaccagtaacatgacagtggacagcactggtccagaggtg
tgtaaggtctatgatccaaatcttcaaggtctggtggtgttttaccagtacttcctggac
ttactctctggaacgggtttcatggagtactcctacatgttctatggttactataacaac
accgtggcagagagcagtggcttccactacaacctgcccctggcctacctcctcacctcc
gtcttctacttcgccttctgtctcatctgcatcatcgcacgcatggggagcgcacttcgc
gttgctgtggcaacaggcagcggtgctgccggcagttacagcaaaatggtgttcactggc
tgggactacggttgccagggagaccgggccaccaaactcaaacagaaaagcatccactac
cagctacaggtggacctggaggaggagaggctacagaaaaaggctttgtctctaacctta
ggtcagacagtgggtctgtgttctctacgcatcttcctcatgcttgtctccctcgccctc
atagggggagctttctttggcatcttcaaggctactgtcttcagccaggtgcaggttgga
gcagagggcattctgggcctgttctgggtttaccttccttccatcgtcatcacaacagga
aactttgttgtgcccttcatgtgtgaccagatagccttgtttgagagatattctcctagt
accaccatcatcatggcactgttcaggtcagtgtttctgcgtatgataagtctgggagtg
ctgctgtttactctgtggagtcagatcacctgctttaaagacagtccaaaatgtgagctc
tgccagtacaacaacaaggaatatccgtgctgggagacgcgtgtgggacaggagatgtac
aaactggccttgtttgacttcctcattaccatcgccatgcttatcctggtggagtttcca
cgcaggttgtttgtggaccactactcctgtgtactgacccggtgggtaggtcgtcaggag
ttcttggtgcctcccaatgtgctgggtctggtctacggtcagacagtggtgtggactgga
gctctgttctgccctctgctgcctctcatcaacacactcaagttcttcatcctcttctac
tgcaagaaggtcactctgttttctaactgtcgtccggcggtgaagacgttccgctccacc
acctccaccatcttcttcctggtggtgttgctgtttggctggggcctcgccctcgtcgcc
atgatctacagcctggcccagatccatccctctatgagctgtggtccgttccgctctctc
actatgatgtggagtatcgttcccaacaccttctacactctctccctgacaacacaggac
ttcatcttctacatgggctcccaggccttctccatccctctcttcatcttctcttgtgtg
gtgctgtgttacgtagcagctctagccgcagtctatgggaagagtgttgatctgctaaag
gcccagcttaaactggagggacgtgataagcagttcctggtcaagcagattgaagagctg
agtagagagatgggggttccaacaagggaccaattggacactggtgcagcaaactga
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