KEGG   Oncorhynchus nerka (sockeye salmon): 115147136
Entry
115147136         CDS       T07952                                 
Name
(RefSeq) histone H2A.V isoform X1
  KO
K11251  histone H2A
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03082  ATP-dependent chromatin remodeling
one04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    115147136
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    115147136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115147136
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115147136
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    115147136
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115147136
SSDB
Motif
Pfam: Histone Histone_H2A_C CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 115147136
NCBI-ProteinID: XP_029545031
LinkDB
Position
LG19:complement(3944217..3953342)
AA seq 179 aa
MSRRLDASSCVSCSLWKGWCPLPPPPPRLLPPRSLPLSPSAIFSTASQLLPLAGGKAGKD
SGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLEL
AGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTA
NT seq 540 nt   +upstreamnt  +downstreamnt
atgtccaggcgcttggacgccagctcctgcgtctcctgttctctctggaagggctggtgc
ccgctcccacctccccctccgcggctgctgccaccgcgctcgctcccactgtcaccatcc
gccatcttcagcaccgccagccagcttctccctcttgcaggaggaaaagcaggaaaggac
agtggcaaagccaaggcgaaggctgtgtctcgctcccaaagggctggactccagttcccg
gtgggtcgtatccacagacacctgaagacccgaaccaccagccacggcagagtgggagcc
accgcagcagtatacagtgccgccatcttggagtacctcacggctgaggtgttggagttg
gcagggaatgcctccaaggatctgaaggtgaagcgtatcactccgcgtcacttacagttg
gccatccgcggagacgaggaattggactcactcatcaaggccaccatcgctggaggaggt
gtaattcctcacatccacaagtctctgattggaaagaagggccagcagaagactgcatag

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