Oncorhynchus nerka (sockeye salmon): 115147175
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Entry
115147175 CDS
T07952
Name
(RefSeq) AP-3 complex subunit beta-1-like isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115147175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115147175
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Others
AP-3 complex
115147175
Endosome - Golgi transport
115147175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
HEAT_GCN1
SEEEED
MOR2-PAG1_C
Utp14
TPR_CAND1
Motif
Other DBs
NCBI-GeneID:
115147175
NCBI-ProteinID:
XP_029545105
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All DBs
Position
LG19:complement(7237463..7299979)
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AA seq
1099 aa
AA seq
DB search
MLSMSTNNLSYNDQGGSDSAVEVGQETTPTSSNAGAGFGLFSTNFKKNDDLKEMLESNKD
SLKLDAMKRIIALIAKGKNASELFPAVVKNVASKNIELKKLVYVYLVRYAEEQQDLALLS
ISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTSAHAIQK
LYSLDPDQKEHLIEVIDKLLKDKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKLCNLLVDV
EEWGQVVIITMLTRYARTQFTSPWKEDGLFDENSETAFYESDEKKTKNGDEKKSYVMDPD
HRLLLRNTKPLLQSRNTAVVVSVAQLYWHLAPKHEVGVITKSLVRLLRSHREVQYVVLQN
IATMSIQRKGMFEPYMKSFYVRSTDATHIKSLKLEILTSLANEANISTILREFQTYVKSQ
DKQFAAGTIQAIGRCATNISEVTDTCLQGLVLLLSNRDETVVAESVVVIKKLLQTQPTQH
SDIIKHMAKLFDNIAVPMARASILWLMGEYCERVPQIAPDVLRKMAKSFTSEEDIVKLQT
VNLAAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIRQLIVPNEKSGALGKYARR
ILLAPKPAPVLESTYKDRDRYQLGTLSHTINTKASGYLELSDWPAVAPDQSVRNVEVIEP
VKEWAPSLGKTGKSKLSKSSDDKFYSDSGEEEEKGSGSSSSDDSSSSSSEESSSEAESDE
EKSSEESDKSSSQSEKSSSESDSEQKKTTKKPPQKKTVKPTAKDSDSDENGNVAKETSSS
SAEETSSGSESGSDADSHSGTEHKKKTKSKAKPKMEVKSTKEVSLLDLDDFTPTPVTRPK
TSVLSPSLLGDLEGLSLSNISSTIQVSGPAFVPEKSHDLLHRMTGKGLSAQYQFPRQPCL
YQPTMVSVQISLTNTTDHPLEQIHIGDRSPTGLNMHCFNTIECLLPEASVTVSLGVDFND
STQAANFQLCTKEDQFSVSIQPAVGELFLPATMTEQDFRKEQGKLLGMNESSATITMAAE
NTTRQPISRQVATVANLGVVLSGQDNIHRFAGKTASSGAVVLVTVELRESSAALITINTE
KSVMGPMLLRDLKSALARA
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcatgtcgacgaacaatttgtcgtacaacgaccaaggaggatcggattcagcc
gtggaggttggtcaggagactaccccgacctcctccaatgctggagctggatttggcctg
ttcagcaccaactttaaaaagaatgatgaccttaaagagatgctggagagcaataaggac
tcactcaaactggacgccatgaagaggatcattgcgctgatcgccaaggggaagaatgcc
tccgagctgttcccagctgtggtgaagaacgtggccagtaagaacatagagctgaagaag
ttggtgtatgtgtacctggtgaggtatgcagaggagcagcaggacctggctctactgtcc
atcagcacctttcagagggccctcaaggaccctaaccagctgatcagagccagtgctctg
agggttctgtccagtatcagagtccccatcatcgttcccatcatgatgctggccatcaag
gaggctgcctccgacatgtccccttacgtcaggaaaacatctgcccacgccatccagaaa
ctctacagcctggatccagatcagaaggaacacctgatagaagtcattgataaattgctg
aaggacaaaagcactctggtagcgggcagcgtggtgatggcctttgaggaagtgtgtccc
gaccgtattgacctgatccataagaactaccgtaaactctgcaacctgctggtggacgtg
gaggagtggggtcaggtggtcatcatcaccatgttgacccgctacgccaggacgcagttc
accagcccctggaaagaggacggtctgtttgatgagaacagtgagacggcgttctatgag
tctgatgagaaaaagacgaaaaatggggacgaaaagaagtcctacgtgatggaccctgac
cacagactgcttctgaggaacaccaagcctctactacagagtagaaacactgccgtggtg
gtgtcagtagctcagctgtactggcacctggctcctaaacacgaggtcggcgtcatcacc
aagtcactggtcagactgctccgaagccacagagaggtgcagtacgttgtgttacagaac
atcgccaccatgtctatccagaggaagggcatgtttgaaccttacatgaagagtttctat
gtgagatccacagatgccactcacatcaaatcgctcaagctggagatcttgaccagcctg
gccaacgaagccaacatctcaaccatccttagagagttccagacttatgtgaagagccaa
gacaagcagtttgcagccggtaccatccaggccatcggcaggtgtgccaccaacatctct
gaggtgacagacacctgcctccaaggactggtgctgctgctctccaaccgagacgagacg
gtggtggctgagagcgtggtggtcatcaagaagcttctccagacccagcccacccagcac
agtgacatcatcaaacacatggccaagctcttcgacaacatcgctgtgccgatggcacgg
gccagcatcctgtggctgatgggggagtactgtgagagggtccctcagatcgcccccgac
gtcctccgcaagatggccaagagcttcacctccgaggaggacatcgtcaagctgcagact
gtcaacctggctgccaaactctacctcaccaactccaaacagaccaagttgttgacccag
tacattttgaacctggggaaatatgaccagaactatgacatcagagaccgcacgcgcttc
atccgccagctcatcgtgcccaatgagaagagcggtgcactcggcaaatatgcccgccgc
atcctgctggcgcccaagccggcgcccgtcctcgagtccacatacaaagaccgtgatcgt
taccagttgggaacgctgtcccacaccatcaacaccaaagccagcggctacctggagctc
tctgattggcctgccgtggctcctgaccaatcagtgaggaacgtggaggtgattgagccg
gtgaaggagtgggctccgtcgctagggaagactggaaagtccaagctgtccaagtcatca
gatgataagttctactctgactctggagaggaggaggagaagggctcagggagcagtagc
agtgatgacagcagcagcagtagtagtgaagagtcaagcagtgaggcggagagcgatgag
gaaaagagcagtgaagagtccgacaagtcctccagccaatcagagaagagttccagtgag
tccgactctgaacagaagaaaacaactaagaaaccaccacagaagaagacagtcaaacca
acggccaaagacagtgattcggacgaaaacgggaacgttgctaaagaaaccagcagttcg
tctgcagaagagacctcgtctggttccgaatctgggtccgacgcagactcccactcaggc
accgaacacaagaagaaaaccaagtctaaagccaaacccaagatggaggtgaagtcaacg
aaggaggtgtccctgttggatttggacgacttcactcctacaccagtgacccggcccaag
acgtctgtcctctcccccagcctgctcggagacctggaaggcctgtctctctccaacatc
tcctccaccatacaggtgagcggcccggcgtttgtccccgagaagagccatgacctgctg
caccgtatgaccggtaaaggtctgtcagcccagtaccagttccccagacagccctgtctc
taccagcccaccatggtctcagtccagatcagcctgaccaacaccacagaccaccctctg
gaacagatccacatcggagacaggagccccacaggactcaacatgcactgcttcaatact
atagagtgtctgctgccagaggcctcggtgactgtgtctttgggcgtcgacttcaacgac
tctacacaagcagccaacttccagctgtgtacgaaggaggaccagttcagtgtgtccatc
cagcctgctgtaggagaactcttcctacccgccaccatgacagaacaggacttccgcaag
gagcaagggaaactgctgggcatgaacgagagctcggcaaccatcaccatggcagcagag
aacacgacccgccaaccaatcagcagacaggtggcaaccgtggccaacctgggagtggtt
ctatccggtcaagacaacatccacaggtttgctggtaagacggccagtagtggagctgtg
gtgctggtgacggtggagctgagggagtcgtctgcagctctgatcaccatcaacacagag
aagagtgtcatgggccccatgctgctccgcgacctgaaaagtgccctggcccgggcctag
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