Oscillatoria nigro-viridis: Osc7112_1808
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Entry
Osc7112_1808 CDS
T02375
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
oni
Oscillatoria nigro-viridis
Pathway
oni03410
Base excision repair
oni03430
Mismatch repair
oni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Osc7112_1808
03430 Mismatch repair
Osc7112_1808
03440 Homologous recombination
Osc7112_1808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oni03400
]
Osc7112_1808
DNA repair and recombination proteins [BR:
oni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Osc7112_1808
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Osc7112_1808
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Osc7112_1808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
GGDEF_2
Toprim
Motif
Other DBs
NCBI-ProteinID:
AFZ06298
UniProt:
K9VDP6
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All DBs
Position
2106371..2108491
Genome browser
AA seq
706 aa
AA seq
DB search
MQEQPTSVPPHFHRLPNQRWQIYSPQRQQAEEFAAEIGLSPLLAQVLINRGIDSVKEVQG
FIEPESLVLPAPTDEFPDLAASVKLLREAISGGQKIAICGDYDADGMTSTALLLRALRVL
GANVDYAIPSRMREGYGINDRIVEEFHSEGVALILTVDNGIAAYGPVARARELGVKVIIT
DHHDLPPKLPPADAILNPKLIAESSPYRGLAGVGVAYVLAITLAQDMKKVGGLVNPLLEL
FTLGTIADLAPLTGVNRRWVKRGLRLLPHSTLAGIQALIHVAGVQPGSAENPSILNSKIK
GGHGGTAPTTQNSLKPEDIGFRLGPRINAVGRLADPQIVIELLTADDRELALKNAMQCEQ
INQRRQELCQEIEQEAIAWCEERAIDLQQERVLVVVQPGWHHGVIGIVASRLVERYGVPV
FIGTFEDEAVGAVPPCPPAKIVRGSARGIPEFNVFDGLNFCADLLTKFGGHKAAGGFSMP
AQNLEQFRNQLSIFANQCLQPEHLKPLVSVDVRADLAEINLDLYRQIDALEPCGIENKAP
VFWTPNVCITEQKIVGKGGHVKLTATQEGNVSASVKAIAWRWGEYFPLPRRVDIAYRLRE
NSFNGKTSVELELLGVRLPANAATSKPPRFGKVEFDYCDRTYSCSLSPAGSIEELRIRNS
QGQVLAVAPGQNIGLLGNSRKDAREVDVSLPFFENLIQTAKHALGI
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagagcaaccgacatctgtgcccccgcattttcaccgattgccaaaccaacggtgg
caaatttattcgcctcaacgacagcaagccgaagagtttgccgccgaaatcggtttgtcg
cccttgctggcacaggtactgattaaccggggcatcgattcggttaaagaagtgcaaggg
tttatcgaaccggaatctctggttttgccggcgccaaccgatgagtttccagatttggct
gcgagtgtcaaattgttgcgggaggcgatttcgggagggcaaaaaattgcgatttgcggc
gactacgatgctgacgggatgacgagcacggctttgttgctgcgagctctcagggttctg
ggggcgaatgtggattatgctattcccagccggatgcgagaaggttatgggattaacgat
cgcattgtagaagaatttcactcggaaggtgtcgctctcattctcacggttgacaacgga
attgcagcctacggcccggttgccagagcgcgagaactcggtgtcaaagttattattaca
gaccaccacgatttgccgccaaaactgcccccggccgatgctattctcaacccgaaatta
attgcagaatcttcgccttatcgcggtttggctggcgtaggcgttgcttatgttttggcg
attactttggctcaggatatgaaaaaagtggggggattggtgaatccgctgctggagtta
tttacgttgggaactattgcggatttagcacctttgactggagttaaccgccgctgggtg
aagcgtggtttgcggctgttacctcactcgacattggcgggtattcaggctttgattcac
gtggcgggagtgcagccgggaagcgccgaaaatccctcaattctcaactcaaaaatcaag
ggcgggcacgggggcaccgcccctacaactcaaaattcgttgaagcctgaagatattggt
tttcgacttgggccccggataaatgctgtggggcggctggctgaccctcaaattgtgata
gagttgctgactgcagacgatcgcgaattggctcttaaaaacgcgatgcagtgcgaacaa
atcaatcagcgcaggcaggagttgtgccaggaaattgagcaggaagccattgcttggtgc
gaggaaagggcgatagacttgcagcaagaacgagttttagttgtggtgcaaccgggttgg
caccacggggtgatcgggattgtagcttctcggttggtggaacgctacggcgtacctgta
tttattggtacttttgaggatgaggctgtaggggcggtgcccccgtgcccgcccgctaaa
attgtgcggggttcggcgaggggaattcctgagtttaatgtatttgacgggctgaatttt
tgcgcggatttattaactaaatttggcggacacaaagcggcgggcggtttttctatgccg
gcccagaatctcgaacaattccgcaatcaactctcaatttttgccaatcaatgtttgcag
ccggaacacctaaaaccgctggtttcagtagatgtgcgagcggatttggctgagattaat
ctcgacctttaccgacaaattgatgctctggaaccttgcgggattgaaaataaggctcct
gtattttggacgcctaatgtttgcataactgaacagaaaattgtgggtaaaggaggtcac
gttaaactaactgcaactcaagaaggaaatgtatcggctagtgtgaaggcgattgcttgg
cgttggggcgaatattttcctttgcctcggcgggttgatattgcttaccgattgcgggaa
aatagttttaatggcaagacatcggttgagttagaattgttgggtgtccggctaccggca
aatgctgctacctcgaagccgccgaggttcggaaaagttgagtttgattattgcgatcgc
acttattcttgcagtctgtctcctgcaggctcgatcgaggaattgagaattcgcaactct
caaggacaagttttggctgttgcacccggacaaaacatcggtttgttgggcaactcccgc
aaagatgctagagaagtcgatgtatctctacctttttttgagaatttgattcaaactgct
aaacacgccctcggtatttga
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