Oscillatoria nigro-viridis: Osc7112_2149
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Entry
Osc7112_2149 CDS
T02375
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
oni
Oscillatoria nigro-viridis
Brite
KEGG Orthology (KO) [BR:
oni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oni03016
]
Osc7112_2149
Enzymes [BR:
oni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Osc7112_2149
Transfer RNA biogenesis [BR:
oni03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Osc7112_2149
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Arnt_C
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AFZ06614
UniProt:
K9VGH8
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All DBs
Position
2509662..2511668
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AA seq
668 aa
AA seq
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MEKGTLVEFRVHGDRRLAVADRPDGKKNWVVVDENGQPHSIPPKQITYEVVGETYKPSDI
PKFLKEVEAYSDPSSLEVAWELLVGDGETADPESLAMLLFSESSPAQCYAAYCLLSTDKL
YFKQKGDRYEPRSAAQVAEIKHQQEVEQQRHQESQGFWDRVKQRLAGKNVDWEHSDRTRL
DALERFAILGEEATHRTPALETLASLQRSENPEAAFGLLVDLGLWSTHENLFLRRSQIPL
QFSAKVLEVAQRCLENPPTDSDTNRLDLTHLKVYTIDDESTTEIDDGLSLEFLENGQQRI
WIHIADPTRLLSPGDELDLEARKRTTTVYLPTGMIPMFPPALATGPMSLIQGKECSALSF
SVTLDETGAAQDYSIHISTIKPTYRLTYDDVDEMLELGIEAEPEIAAIASAAKLRQKWRE
AQGAISIFMPESVIKVNGDDIKIYVIDDSTARMLVAEMMILAGELAARYGQAHSLPIPYR
YQPQPELPPDEELLAVPAGPARACAVRRCMPRSEMGLTPGRHAGLGLELYTQVTSPIRRY
TDLLTHFQIKAHLRGEPLPFSAEEIQDIVMCLGTAVKEASTVERQTNRYWGLEYLRRNPD
EVWEALMLRWLREDSNLGLILLEELGLELAMRFGRSVEIGDRLEVKVTHCDPRSDVINFQ
EMIFEAAQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtggagaagggaacgttagtagaatttagagtgcacggcgaccgccgtctggcagttgcc
gatcgccccgacggcaagaaaaactgggtggtggtagacgaaaacggtcaaccgcacagc
ataccgcccaaacaaatcacctacgaagtagtcggagaaacttacaaaccatccgatatt
cccaaatttctcaaagaagtagaagcatactcagatccgtcgagtttggaagttgcttgg
gaactcctagtcggtgacggagaaacagcagatcccgaatccctggcaatgctgctattt
tctgagagtagtccggcccagtgttacgcggcttactgtttgctatcaacagataagctg
tatttcaaacaaaagggcgatcgctacgaaccgcgatcggccgcccaagtagccgaaatc
aaacaccagcaagaagtagaacagcagcgacaccaagaatcccaaggattttgggatcga
gtcaaacagcggctggcaggaaaaaatgtagattgggaacacagcgatcgaactcgcctc
gatgccctagaacgctttgccatcctcggagaagaagcaacgcaccgcaccccagcctta
gaaactttagccagcttgcaacggtccgaaaaccccgaagcagcatttggcctcctagtc
gatctcggcctctggagtacccacgaaaacctgtttttgcggcgcagccaaattccccta
caattctccgcaaaggtattagaagtggcccaacgctgcctagaaaatcccccaaccgac
tccgacacaaatcgtctcgatttaactcacctcaaggtttacacgatcgacgacgaaagc
accaccgaaatcgacgacggcctcagcttagaattcctcgaaaacgggcagcagcggatc
tggatacacatcgccgatcccacccgcttgctttcccccggagacgaactcgacctcgaa
gccagaaagcgcaccactacggtttacctgcccacgggaatgatccccatgtttccccca
gctttggcaaccgggccgatgagtttaattcaaggcaaagagtgcagcgccctcagcttc
agcgtcaccttagacgaaaccggcgcggctcaagattacagcatccacatcagcaccata
aaacccacctaccgcttaacctacgatgacgtagacgaaatgctggagttgggaatcgaa
gcagaaccggaaatagcagcgatcgcctctgcggcaaaactgcgccaaaaatggcgggaa
gcccaaggcgcaatcagcattttcatgcccgaatccgtcatcaaagtcaacggcgacgac
atcaaaatctacgtcatcgacgactccacagcccggatgctagtagccgaaatgatgatt
ttagccggcgaactagccgcccgctacggtcaagctcacagcctgcccataccctaccgc
tatcagccacagcccgaacttcctcccgatgaagaactgctggccgttcccgcaggcccc
gcccgcgcttgcgccgtgcgccggtgtatgccccgcagcgaaatgggcctcacccccgga
cgccacgccggcttgggtttggaattatacactcaagttacttccccgatccgccgctat
accgacttgctgactcacttccaaatcaaagcccacctgcggggcgaaccactgcctttt
tccgctgaagaaatacaggacattgtgatgtgtctcggcaccgcagttaaagaagcatcc
actgtcgaacgccaaactaaccgctattggggattggaatatttgcggcgcaacccagac
gaagtttgggaagctttaatgctgcgctggctgagggaagacagcaatctcggattgatt
ttattggaagagttgggtttagaattggcaatgcgatttggtcgatcggtcgaaataggc
gatcggctagaagtcaaagtcacccactgcgatccgcgatcggatgtcattaacttccaa
gaaatgatatttgaagccgcacaatag
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