Oscillatoria nigro-viridis: Osc7112_4351
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Entry
Osc7112_4351 CDS
T02375
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
oni
Oscillatoria nigro-viridis
Brite
KEGG Orthology (KO) [BR:
oni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oni03400
]
Osc7112_4351
DNA repair and recombination proteins [BR:
oni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Osc7112_4351
Archaeal homologous recombinant proteins
Osc7112_4351
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Tape_meas_lam_C
Motif
Other DBs
NCBI-ProteinID:
AFZ08660
UniProt:
K9VN65
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Position
complement(5167374..5168615)
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AA seq
413 aa
AA seq
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MIKILHLSDIHMGSGFSHGRINPETGLNTRLEDFAATLSKCMDRAISEPVDLVIFGGDAF
PDSTPAPFVKEAFARQFSRLVDAQIPTVLLVGNHDQHSQGQGGASLGIYRTLGIPKFIVG
DRLDTHLIQTRSGPVQVVTLPWLTRSTLMTRSETESLSMGDVNQLLTEKLTIAMEGEIRR
LNPDIPTVLLAHLMADKASLGAERFLAVGKGFNIPVSMLTRPCFDYVALGHVHKHQNLNA
SNNPPVIYPGSIERVDFSEEKEDKGFVLVNLERGKAEWEFCTLPVRVFQTIKVNVSESEN
PQAELVKAIGKKQIQDAVVRLIYQLRSEQLDLIDNAELHALLAEAHSYTIQPELVSQLAR
PRLPELNANNSIEPLEALKTYLASREDLKDVAESMLEAAQGLLGGAEEVLVEF
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaatcttacacctttcagacattcacatgggcagcggcttttctcacggccgg
attaatccagaaaccggtttaaatacgcggttggaagacttcgcggcgacgctgagtaaa
tgtatggacagagcaatttctgaacccgtagatttagtcatattcggcggcgatgctttc
ccggattcgacgcctgcgccgtttgtaaaagaggcttttgcccgccaattcagccgcttg
gtggacgcgcaaattccgacggttttgctagtaggaaatcacgaccaacattctcaggga
caaggcggcgcgagtttgggaatttaccggactttggggatacctaagtttattgtaggc
gatcgcctggacactcacctgattcaaacccgcagcgggcccgtacaggtggtaacattg
ccttggttgactcgatcgaccttaatgacacgttccgagactgaaagcctgtctatgggc
gatgttaaccaattgttaaccgaaaaactgacgatcgcaatggaaggcgaaatccggcgc
ctcaaccccgacataccaaccgtacttttagcgcacttaatggcagataaagcaagtctg
ggtgccgaacgttttttagcagttggaaaaggttttaacattcccgtttccatgctaact
cgcccttgttttgattacgttgctctcggccacgttcacaaacaccaaaatctcaacgct
tccaacaatccgcccgtaatttatcccggaagtatcgaacgagttgattttagcgaagag
aaagaagataaaggttttgtgttagttaatttggaacgggggaaagcagagtgggaattt
tgcactttgccagtccgggtatttcagactattaaagtgaatgtttcggaatcggaaaac
ccgcaagcagagttagttaaagctattggcaagaaacagatacaagacgcggttgtgaga
ttaatttaccaattgcgatcggaacaattggatttaatcgacaacgcagaattgcacgca
cttctggccgaagcgcacagctacacaattcagccggaattagtcagtcagctagctaga
ccgcggttgcccgaattgaatgctaataatagtatagaaccgttagaagctttgaaaact
tatctggcaagtcgcgaagatttgaaagatgttgcggagagtatgttggaggcggcgcag
ggtttgttgggcggcgcggaggaagttttggtagaattctag
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