Oscillatoria nigro-viridis: Osc7112_4582
Help
Entry
Osc7112_4582 CDS
T02375
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
oni
Oscillatoria nigro-viridis
Brite
KEGG Orthology (KO) [BR:
oni00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
Osc7112_4582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
Zf_2nd_IFT121
Motif
Other DBs
NCBI-ProteinID:
AFZ08877
UniProt:
K9VN24
LinkDB
All DBs
Position
5485142..5490814
Genome browser
AA seq
1890 aa
AA seq
DB search
MHDPINAFNTIRDNFLLYVKTAFGTQFPEIERERERLLRQPGAFHQEPWIEPMPSYQKSG
KTINDLDISNVPGLDETALQDFKQLASCGLVGNYELYSHQIQMLRQALAGNNAVVTAGTG
SGKTESFLLPLFAYLAQESINWKPPNAEPEHLNDWWKNEEWQNKCNPLVNKKRSFKKSYR
VPQRSHEQRDAAVRALILYPMNALVEDQLTRLRRALDSQAARDWFQDNRKGNRVYFGRYN
GVTPVPGHEYKDNRKPNGKKIEELLEAMQQMQLSADRASEHADRTGEEDVRFFFPRLDGA
EMRCRWDMKDAPPDILITNYSMLSIMLMRDLERDIFEKTKEWLNKDGSVFHLIVDELHLY
RGTSGTEVAYLLRLLLQRLGLHPGHPKLRVLASSASLEPDDPKSLEFLNQFFGSQWNSQQ
IIPGRLEQIPLIEGQEFLESEPFIALAAEINNAETLQSTAAYSACRQIVESETAQVGARM
VNACKVDGKIRAVAIANFAQQIFGNDLPDENLELAVTGLLATRGLSNQTSLPSFRLHWFF
RNIEGLWACTKPNHGCEENEISKNRLVGKLFVENPPILYDEYRVLELLYCEQCGTVFFGG
NRLTRQNDGWELLPTEPDIEGIPDRRAGRFIEQRTYKEFAIFWPSREIHEDSKDWGQSKK
AESGCWRKAWLHTRSGIVRLDPDSSDDLTVEGYIFYRPNLLPENEEKVKALPSVCACCGA
DYSKRKFRKSSIRGFRTGFSKVSQLLSKELFYQLPGDAESRKLVVFSDSREDAASISNGM
ERSHYDDLVREALFDELGQLAIGELCLLEDIQQHNRPARPEALLFDRRNPQAVDQMQKAI
KNVNKPLPGGLDPEDLELLQNRRDNAQKLLNEIQERGKIRTVPLRALFEGIENSQDPGLL
IERLIKLGVNPAGNDVEYQRFSYDGRDDHHWTKLFDFKTAGWKPDLSPGAKIPENKLRDK
VKSEVCDTLFSRLYFGIEASGLGYIRLNLPPNQLEQLAIQCGVSSLVFESICDGVLRILG
ELYRYPKPKQHQDYYPLDDWKDWGDARSNLRNYIKECAKAGGISEQELKPALWSAICTQG
QHHHFKLNPRHLSVRVAVSDDPVWQCESCQRHHLHRAGGVCTNCLAHLPAKPNRKCGDLY
DRNYFATQAVNKRQPLRLHCEELTGQTDDQAERQRHFRNIIVNFGEQDRDFIPAVDIIDI
LSVTTTMEVGIDIGSLMAVVMANMPPMRFNYQQRAGRGGRRGQAFAIVLTLCRGRSHDEF
YYRHPEKITGDPPPVPFLAMSQVEMAQRLLTKECLRLAFIAAGVNCWEVEKKPDSHGEFG
TVQNWKETEERREQVRRWLRTSCEVTEVINSLLVGVEGIDRDNLENYARQQLFEKINECA
NNLELTGDGLAERLAEGGILPMYGMPSRVRDLYHHEPSRKQKVSTIDRDLDLAVAEFAPG
SEKTKDKRIYTAIGFTAPLISDSKHGLVPAGEPVSDRQWMLRCQRCQHTATSNTIFEDII
CPKCAATEEQGFRVFQWAVPLAFRTSINPGADAKEEYDALITGAGSVAESQPQDFNLVNN
TNTQIAFSKSGRVFRVNDNRGQLFKGTIGTATFGRGDKLLPDQWIDERFQNKPDGVRFKP
QGESEAIAIIAPKTTGVLRIKPVTVPDGLCLDPIAPGSAVKAAFYSAAFTVRAVAAQELD
IDPEELDISGLRQVELEDKKVGEIVISDRLANGSGFTDWLAHRWEDILTDKILNSQNSFA
EAIMSPQHRQKCDSSCYDCLQQYRNMNYHGLLDWRLGLSLLRALASSNFQCGLDGDFSTP
DLENWLLNATALRDIFCASFSCSGEQFGALPGFAVGDKSVIIVHPLWEVDNPQGLLHEAI
ATVEAPDRLRYLDTFNLLRRPSWCYQSLDD
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatccaattaacgcatttaacacaattcgcgacaactttctactttatgtaaaa
accgctttcggaactcaatttcccgaaattgaacgagaacgggaaagactgctgcggcaa
cccggtgcattccatcaagaaccctggattgaaccgatgccaagctatcaaaaatcaggt
aaaaccatcaatgatttagatatttccaatgtaccgggattagatgaaactgcccttcaa
gactttaaacaacttgcctcctgcggacttgtaggcaattacgaactgtacagccaccaa
atccaaatgctacggcaagcattagcaggcaacaatgctgtagtaactgccggtacaggt
tcggggaaaaccgaatcttttctgttacctttgtttgcttacctcgcgcaagaatcaata
aattggaagccgcctaatgccgaaccagaacaccttaacgattggtggaaaaatgaagaa
tggcagaacaaatgcaatccgttagtaaacaaaaaacgcagctttaagaaatcttatcgg
gttcctcagagaagtcacgaacagcgggatgcagcagttcgcgccttgattttatatccc
atgaatgctttagttgaagaccagcttaccaggctgcgccgcgctttagattctcaagca
gcgcgagattggtttcaagataatagaaaaggcaatcgagtctattttggcaggtacaac
ggcgttactcccgtaccggggcatgaatacaaagacaatcgtaaacctaatggaaaaaaa
atagaagaacttttggaagcaatgcagcagatgcagttatcagccgatcgcgctagcgaa
cacgccgatcgcactggcgaggaagatgtgaggttctttttcccgcgcttagatggggca
gaaatgcgctgccgctgggatatgaaagacgccccgccagatatcttaatcaccaactat
tctatgctcagtatcatgctgatgcgcgatctcgaacgagatatttttgaaaaaacaaag
gaatggttaaacaaagatggcagcgtctttcatttaattgttgacgaattgcacttatat
cgcggtacttctgggacagaagttgcttatttgctgcgacttttgctgcaacgtttgggg
ctgcatcccggtcatccaaaattgcgggttcttgcttctagtgcatctttggaaccagac
gatccaaaaagcttagaatttttgaatcaattctttggttctcaatggaattcccaacag
attataccgggtcgtttagaacaaattccactaattgaaggtcaagagtttctggagagc
gaaccgtttatcgctttggcagcagaaatcaacaatgcagaaacgttgcagtcaacggct
gcatacagtgcttgccgtcaaattgtggaatctgaaaccgcgcaagttggtgctagaatg
gtcaatgcttgtaaagttgacggcaaaattcgcgccgtagcgatcgcaaattttgctcaa
cagattttcggcaatgacttacccgatgaaaacctcgaactcgcagtaacaggacttcta
gcgactcgcggtttatcgaaccaaacatctttgccatctttccggctgcactggtttttc
aggaatattgaggggctgtgggcttgcactaaacccaatcacgggtgcgaagaaaatgaa
attagtaaaaatcgattagttggcaaactatttgtcgaaaatcctcccatactttacgac
gaataccgagttttagaactgctttattgcgaacagtgtggcactgtgttttttggggga
aacaggctgacaagacagaatgacggatgggaacttttgccgacggaaccagatattgag
ggaattcctgacagaagagctggacgatttattgagcagaggacttacaaagaatttgct
atattttggccttccagagaaatccatgaagattcaaaggattggggacagtctaagaaa
gcagagtcaggttgctggcgcaaggcatggctacatactcgcagcggtatagtccgtttg
gaccctgattcctctgatgacttgacagttgaaggttatattttttatcgaccgaacctg
ctaccagaaaatgaggaaaaagttaaagctttgccttcagtttgtgcttgctgcggtgca
gactatagcaaacgaaagtttcgcaagtcttcaattcgagggttccgcacaggtttttct
aaagtgagtcagttactttccaaagaactgttttatcagttaccgggagatgcagaatcc
cgcaaattagttgtgttttctgacagtcgcgaagatgccgcttctatatctaatggcatg
gagcgatcgcactacgatgacctggtacgagaagcactttttgatgaactcggacagttg
gcgatcggagaattgtgcctattagaagatattcaacaacacaatcggccagctcgtcca
gaagccctattatttgatcgacgcaacccacaagctgttgaccagatgcaaaaagcaatt
aaaaacgttaacaagccattgccaggaggtctcgatccggaagatttggaactattacaa
aataggcgagataacgctcagaagctactcaatgaaatccaggaaagaggcaagatccgc
acagttcctctcagagcgctatttgaaggcattgagaattcccaagaccccggactcctg
atcgagcgattgataaagttaggcgttaaccctgcgggtaatgatgttgagtaccaaaga
ttttcctatgacggcagagacgatcaccattggacaaaactatttgactttaaaaccgct
gggtggaaaccagacttgtctcccggagcaaaaattccagagaacaaacttcgagacaaa
gtaaaatccgaggtctgtgatacactttttagccgcctatactttgggattgaagcatcc
ggcttgggttatattcgcctgaatttacccccaaatcaattagaacagctagccattcaa
tgcggagtttcaagtttagtatttgagagtatttgcgatggcgtattgcgaattttgggt
gaattatacagatatccaaaaccaaaacaacatcaagattattatccgctggatgactgg
aaagactggggtgatgcgagatcaaacttgcggaattatattaaagagtgtgcaaaagct
ggcggaatttcagaacaggaattgaaaccagcattatggtcagctatttgcacgcagggt
caacaccatcactttaaacttaatccccggcatttatctgtacgagttgctgtgtccgat
gaccctgtgtggcagtgcgagtcttgccagcgccatcacctgcaccgcgccggaggtgtt
tgtactaattgtttggcacatttaccagcgaaacctaatagaaaatgcggggatttgtac
gatcgcaattatttcgccacccaagctgtaaataagcgtcaaccgttgcggttgcactgc
gaagagttgaccgggcaaaccgacgatcaggccgaaaggcaacggcatttccgcaacatc
atcgtgaattttggcgaacaagacagagattttatcccagcggtagatatcatcgatatc
ttgagcgtcacaaccacaatggaagtggggattgatattggcagtttaatggctgttgtg
atggcaaatatgccgccgatgcgctttaattaccaacagcgtgcgggtcgcggagggcgc
cggggtcaggcttttgctattgtacttactctctgtcgcggtcgatcgcacgatgagttt
tattaccggcatcctgaaaaaattacgggcgatccgccaccggttccttttcttgctatg
tcacaggttgagatggcccagcgcctcctaacaaaagaatgtttgagactagcatttatt
gctgctggtgtcaactgctgggaggtggaaaaaaagcctgacagtcacggtgaatttggc
acagttcaaaattggaaggaaacggaagaacggcgcgaacaagttcggcgctggttgaga
acttcttgtgaagtaactgaggtaataaattctctgctagtcggcgttgaaggtatcgat
cgcgataacttagaaaactatgcacgtcagcagttgtttgagaaaattaatgagtgcgcc
aataacttagaattgactggtgatggattggcagaacgcctcgctgagggcgggattttg
ccgatgtacgggatgccttcaagagtgcgtgatttgtaccatcacgaaccgtctagaaaa
cagaaagtttctactatcgatcgagatttagatttagcagtcgcggaatttgcaccaggt
tccgaaaaaactaaagacaagcgaatttataccgcgatcgggtttacagcaccgttaatt
tcagacagtaaacacgggttagttcctgcaggcgaacctgtgagcgatcgccaatggatg
ttgaggtgtcagcgctgccaacatacggcaacctctaatacaatatttgaagatataatc
tgtccgaaatgcgcggcaactgaggaacagggatttcgagtttttcagtgggctgtccct
ttagctttccgtaccagcatcaatcctggagctgacgctaaagaggaatacgatgcgtta
attacaggtgcaggcagcgtcgccgagtcccaacctcaagattttaacttagtaaataac
acgaatactcagatagctttctctaagtccggccgcgttttccgcgtcaatgacaataga
ggacagctatttaagggaacaataggaactgccacatttggacgcggtgataaactatta
cccgatcagtggattgatgagcgattccagaataagcctgacggggtgaggtttaaaccc
cagggcgagtcagaggcgatcgctataattgccccaaaaactactggcgtactgcgaatt
aagcccgttactgtacctgatggattgtgcctggatcctattgcacccggttctgctgtc
aaagctgctttctactcagccgctttcactgttcgtgctgtagcggcacaggagttagac
atcgatccggaagaattagacatcagcggtttgcgacaggttgaattagaggataaaaaa
gtaggagaaattgtaattagcgatcggcttgctaacggttctggcttcaccgactggtta
gcccatcgctgggaagatatccttacagacaaaattctgaattctcaaaatagctttgct
gaggcaattatgtcaccacaacaccgccaaaaatgcgactcttcttgttacgattgcttg
cagcagtaccgcaatatgaactatcacggtctgctggattggcgtttggggctttccttg
ctgagggcattggctagcagcaattttcaatgcgggctcgatggggatttttctactcct
gacttagaaaattggctgctgaatgcaactgctttgcgcgatatattttgtgcttcgttt
agttgttccggggaacagttcggcgctttaccgggttttgcagtgggggataaaagcgtt
attatcgttcatcctttgtgggaggtagataaccctcaaggcttattgcatgaagcgatt
gctacagtagaagcgcccgatcgacttcgatacctagataccttcaatctcctgcgccgt
ccgagttggtgctatcaatcgctagatgattag
DBGET
integrated database retrieval system
