Oscillatoria nigro-viridis: Osc7112_4584
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Entry
Osc7112_4584 CDS
T02375
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
oni
Oscillatoria nigro-viridis
Pathway
oni03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Osc7112_4584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oni03400
]
Osc7112_4584
Enzymes [BR:
oni01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Osc7112_4584
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Osc7112_4584
DNA repair and recombination proteins [BR:
oni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Osc7112_4584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AFZ08879
UniProt:
K9VMU9
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All DBs
Position
5491619..5492581
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AA seq
320 aa
AA seq
DB search
MPELPEVETICRGLNQATLDREMLGGDVLLNSTIARSISATDFLTQLKGKSIARWYRRGK
YLLAELSQFPEGERERGTGGQGESGRVGEFLAQTPISSQTPSFCPSLLPSKAGWLGVHLR
MTGQLLWVNRSEPLQKHARVRLFFEGNQELRFVDQRTFGQMWYVPAETEVSSTVTGLKLL
GPEPFSEEFTTEYLARKLHRRARPIKTALLDQSLIAGLGNIYADETLFLSGVMPTTLCAD
LTAEQIGRIHTAIIQVLQKAIASGGTTFSNFLNVQGVNGNYGGVAWVYNRAGQPCRTCSA
TIERIKLAGRSTHFCPICQT
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgccagagctgccagaagttgaaactatttgccggggtttgaatcaagcaaccctcgat
cgagaaatgttgggcggcgacgtgttgttaaacagcacgatcgcccgctcaatctctgcg
accgattttttgacacaactcaaaggaaagtcgatcgcccgctggtacagacgcggcaaa
tatctactggcagaactatctcaattcccagaaggagaaagagagagggggacaggggga
cagggggagagtgggagagtgggagaatttcttgcccaaactccaatctcttcccaaacg
ccttctttctgcccctcccttttgccttcaaaagccggctggttgggcgttcacctgcgg
atgaccggtcaactgctgtgggtgaaccgatccgaaccactgcaaaaacacgcgcgagtg
cggctgttttttgaaggaaaccaagaactgcggtttgtagaccagcgcactttcgggcaa
atgtggtacgtgcctgcagaaaccgaggtttccagcactgtcaccggtctgaaactctta
ggccccgaaccgttttcagaggaatttacaacagaatatttggcccgcaagctgcaccgg
cgggcgcgacccataaaaacagctttgctagaccagtcactgatagctggtttgggcaat
atttacgcagacgaaactttgtttttgtcgggagtgatgcccacaactctgtgcgcggat
ttgaccgcagagcaaattgggcgcatccatacagctattatccaagttttacagaaggcg
atcgcatccggcggcaccacttttagcaattttctcaacgtccaaggtgtcaacggcaac
tacggcggtgtcgcttgggtttacaatcgcgccggtcaaccctgccgcacttgctccgca
accatcgaacgtataaaattagcagggcgatcgactcatttttgccccatttgtcagaca
tag
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integrated database retrieval system
