Oscillatoria nigro-viridis: Osc7112_5256
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Entry
Osc7112_5256 CDS
T02375
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
oni
Oscillatoria nigro-viridis
Pathway
oni03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oni00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Osc7112_5256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oni03021
]
Osc7112_5256
03400 DNA repair and recombination proteins [BR:
oni03400
]
Osc7112_5256
Enzymes [BR:
oni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Osc7112_5256
Transcription machinery [BR:
oni03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Osc7112_5256
DNA repair and recombination proteins [BR:
oni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Osc7112_5256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AFZ09506
UniProt:
K9VNH4
LinkDB
All DBs
Position
6293688..6294743
Genome browser
AA seq
351 aa
AA seq
DB search
MVLTVAPSIQNPKSVQGYALQSKIQNQKSKVEKGGHSVAQFQIECIESNTDKDRSQYGKF
VLEPLDRGQGTTVGNALRRVLLSNLEGTAVTSVRIAGVNHEFATIEGVREDVLEILLNMK
EVVLKTHSQQPQIGRLRIEGPVTVTADRFDLPSEVELIDRSQYIATLSPGSVLEMEFRIE
KGIGYRAVDRSRDDGSALDFLQIDAIFMPIRRVNYSVEDARVGGTVEKDRLIMEIWTDGS
VTPQEALSQSANILVDLFAPLKDITQDSLKPEYPGEADPTSQIPIEELQLSVRAYNCLKR
AQINSVADLLDYTQEDLLEIKNFGQKSAEEVIEALQKRLGITLPQEKSAKS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggttctaactgttgccccgtccatccaaaatccgaaatccgttcaggggtatgctctg
caatctaaaatccaaaatcaaaaatccaaagtggaaaagggaggtcactccgtggcgcag
tttcaaattgaatgtatagagtctaacactgacaaagaccgcagtcagtacggaaaattt
gtcctggaaccgctcgatcgcggtcagggaacaactgttgggaatgcgcttcggcgagtt
ctgctgtcaaacttggaaggaacggcagtaacttcagtccgaatcgcgggcgtcaatcac
gagtttgccacgatcgaaggggtacgtgaggatgttctagaaattctcctgaacatgaaa
gaggtcgtcctcaaaactcattctcagcagccgcaaatcggcaggttgcggattgagggg
cccgtcaccgttacggccgatcgattcgatttgccctcagaggtggaattgatcgatcga
tcccagtacattgcaactctctccccaggctctgttctggaaatggaattcagaattgaa
aaaggcatcggataccgagcagtagaccgcagtcgcgatgatgggtcggctttggatttt
ctccaaattgacgccatctttatgccgattcgcagagtcaactacagcgttgaagatgct
cgggtaggcggtacggtcgagaaagaccggctgattatggaaatctggactgatggcagc
gtgactcctcaagaagctttgagtcaatctgccaacatcctggtagatttatttgcacct
ctcaaagacatcacccaagattctctcaaaccagagtatccaggtgaagcagatcctact
agccaaattccgatcgaagaattgcagttgtcagtccgagcttacaactgtctcaagcgg
gctcaaatcaactcagtcgcagacttattggattatacccaagaagacttgctcgagatc
aagaacttcgggcagaagtctgccgaagaagtgattgaagctttacaaaaacgcttgggc
attaccttgccacaggaaaaatcagctaaaagttaa
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