Oscillatoria nigro-viridis: Osc7112_5576
Help
Entry
Osc7112_5576 CDS
T02375
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
oni
Oscillatoria nigro-viridis
Pathway
oni03420
Nucleotide excision repair
oni03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Osc7112_5576
03430 Mismatch repair
Osc7112_5576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oni03400
]
Osc7112_5576
Enzymes [BR:
oni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Osc7112_5576
DNA repair and recombination proteins [BR:
oni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Osc7112_5576
MMR (mismatch excision repair)
Other MMR factors
Osc7112_5576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AFZ09799
UniProt:
K9VQH2
LinkDB
All DBs
Position
6654614..6657076
Genome browser
AA seq
820 aa
AA seq
DB search
MTDEFDTDFMRSTTNTDRPDVASALSESGFAAVLREQACLKIRESLRAGQQDMADWEGGP
LAVSAVPGAGKSTGMAAASAIAIARNGLHSRRQLIVVTFTRSAAANIKTKIRERLTELSL
SQGGFAVHTLHGLALNIAMRHPDLSGLNLENSTLVTPTQSHRLIRTCVELWIAENPRRYQ
VLLEGQQFDGEETERLRRQSVLRTEILPQVAKTVIHEAKSSGLFPEQLLEMSALDTGDGY
EILAVAGGLYQKYQALLRSREFIDYDEMILAALRVLDNPKARAIEQKQVFAVFEDEAQDS
TPLQTRLLETLAIDPERPNSPPNFIRVGDPNQAINSTFTPADPIYFNQFCDECEVENKLA
TMDGAGRSTQVIIDAANFMLKWVNSSKLAGTEQPFRDQTIKPVPSYDPQQNANPAPIGRG
LELHTPRDIYHTVELIGKRVIELVEEFLPADFEFARNEKAIHSGTEASEGENSAKLPLEN
LKSMAILVRENKQGKFIKEVLENPHKHGLSFDLHKYGIKIEDVGERDRHSQVPWEILTLL
QFLDRPHSPDYLKAALKILSDRQLIPKQDYNAFATSPEQFLYPGPLDPQQSDPVRKCRYF
CCGLLQASLELPPYQIISFLALALQYDQTELATADKLAERVAIQTAGNNSMRNILDVLSE
IVSSERFEPVDADDKIEERYTSKGQLTIITMHKAKGLDWDCVFLPFLHEQTIPGNLRVLP
QARFLGDFTLAEVARAQIRASLHGKYPLPNLGEAWEQAGYLKTAEEFRLLYVAMTRAKSL
LWMAAEKKGPFTWNKPENLQEQKPCPVMPVLKQRFPSNAI
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgaatttgatactgattttatgcgatcgacaaccaataccgatcgcccggat
gtagcctcagcgctttcagaatcagggtttgcggccgttttgcgagaacaagcttgcctt
aaaattcgcgaaagcttgcgtgcggggcaacaggacatggcggactgggaaggcggcccc
cttgctgtttctgcggttccgggggccgggaagtctacgggaatggctgctgcgtcggca
attgcgatcgcccgcaacgggcttcacagccgccgccagttaattgtcgtgacatttacg
cgatcggctgctgctaatattaaaactaaaattcgggaaagattgacagaattgtcttta
tctcaaggcggttttgcggtgcacactttgcacggtttagctttgaatattgcgatgcgc
catcccgatttgtcgggtttaaatttagaaaattcaaccttagttactccaactcaaagt
caccgattaattcgcacctgtgtagaactttggattgcggaaaatccccgccgatatcaa
gttttgttagaaggacagcaattcgacggagaggaaacggagagattgcggcgacaatcg
gttttgcggacggaaattttgccgcaggtagctaaaacagtgattcacgaggcaaaatct
tctggtttgtttcccgaacagttgttagaaatgagcgctcttgatactggggacggttat
gagattttagcggtagcgggcggtttatatcaaaaatatcaggctttgttgaggagtcgg
gaattcatcgattacgacgagatgattttagcagctttgcgggtgttggacaatccgaag
gcgagggcgatcgagcaaaagcaagtatttgccgtttttgaggacgaagcgcaggattcg
acacctttgcaaactcggcttttggaaacattggcgatcgatccagagcgtccgaactca
cctcccaattttattagagttggcgacccaaatcaagcaattaattctacttttacaccc
gccgacccgatttattttaaccaattttgtgatgagtgcgaagtagagaataagttagcg
acaatggacggtgcaggccgcagcacccaggtgattatcgatgcagctaactttatgttg
aaatgggtaaatagctcaaaactagcgggaacggaacagccttttcgcgaccaaactatt
aagcctgtacccagctatgacccgcagcaaaatgccaatccggctcccattggtcgaggc
ttagaattgcatactccccgcgatatttaccatacagttgagttgattggcaagcgggta
attgagttagttgaggaatttttacctgccgattttgaatttgcaaggaatgaaaaagct
atccattcaggcacggaagctagcgagggggaaaatagcgcaaaattgcctttagaaaat
ctgaagtcgatggctattttggtgcgggaaaacaaacaaggtaagtttatcaaagaagtg
ctagaaaatcctcacaaacacggattaagctttgatttgcacaaatatgggattaaaatt
gaagatgtgggagaacgggacagacattctcaagtaccttgggaaatcttaacactgctg
caatttctcgatcgcccccactctccagactacctgaaagcagccttaaagattttgagc
gatcggcaactcatccccaaacaagactacaatgcttttgcgactagccccgagcaattc
ctttacccaggccccctagacccgcagcagtcagaccccgttcgcaaatgccgctatttt
tgctgcggtttgctgcaagctagcttagaactgccgccctaccaaatcatctcattttta
gccttagcgctgcaatacgaccaaacagaattagccaccgccgacaaattagcagaacgg
gtagcaattcaaacagccggcaacaattcaatgcggaatattttggacgtacttagcgaa
attgtcagttccgaaagatttgaacctgtggatgcagacgacaaaatagaagaacgctat
accagcaaaggtcaactaacaattattaccatgcacaaagctaaaggattagattgggat
tgcgtatttttgccgtttctgcacgaacaaaccatccccggaaatttgcgagttttgccg
caagcccgatttttaggagatttcactttagcagaggtagcgagagcacagattcgagca
agtttgcacggaaaatatcctttaccaaatctaggcgaagcctgggaacaagctggttat
ttgaaaacagcagaagagtttcgactgctgtatgtggcgatgacgcgagcaaaaagcttg
ctgtggatggcggcggagaaaaaaggcccttttacttggaacaaaccggagaatttacag
gagcaaaaaccttgtccggtaatgcctgttttgaagcagagatttccgagtaatgcgata
taa
DBGET
integrated database retrieval system
