Oscillatoria nigro-viridis: Osc7112_5746
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Entry
Osc7112_5746 CDS
T02375
Name
(GenBank) DNA-directed RNA polymerase gamma chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
oni
Oscillatoria nigro-viridis
Pathway
oni03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oni00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Osc7112_5746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oni03021
]
Osc7112_5746
03400 DNA repair and recombination proteins [BR:
oni03400
]
Osc7112_5746
Enzymes [BR:
oni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Osc7112_5746
Transcription machinery [BR:
oni03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Osc7112_5746
DNA repair and recombination proteins [BR:
oni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Osc7112_5746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
AFZ09957
UniProt:
K9VR30
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All DBs
Position
6882831..6884705
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AA seq
624 aa
AA seq
DB search
MAKIEQRFDYVKIGLASPERIRQWGERTLPNGQITGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVAHVWYLKGI
PSYMAILLDMPLRDVEQIVYFNAYVVLNPGNAEKLQYKQLLTEDAWLEIEDELYSEDSTL
TGVEVGIGAEALQVLLQNIPLESEAEKLREDIANAKGQKRAKLIKRLRVIDNFIATGSQP
DWMVLNVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIIRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPKLKIHQCGLPREMAIELFQPFVIHRLIRQGLVNNIKAAKKLIQRNDPSVWDVLQE
VIEGHPVMLNRAPTLHRLGIQAFEPILVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLSL
ESQAEARLLMLASNNIMSPATGRPIVTPSQDMVLGCYYLTAENPDAQKGAGHYFSNLTDA
VVAYEQGIVDLHSYVWVRFQGAIENTEPEGEPLKVERSTDGIVTKEYKFRRVREDGEGKV
LNQFIRTTPGRIIYHQTIESVINN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaatagaacaacgctttgattacgtcaagatcgggttagcttcaccagaaaga
attcgacagtggggagagagaactttacccaacggtcagataactggagaagtgacaaaa
ccggagaccataaattatcgcacgctaaaacctgaaatggatggcttgttttgcgagcgc
atttttgggccggcaaaagattgggaatgtcattgtgggaagtacaaacgagttcgccat
agaggcattgtttgcgaaagatgcggtgttgaagtcactgaatctcgcgtccgccggcat
cggatgggctttatcaaattagcagctccagtagctcacgtttggtatctcaaaggcatc
ccgagttacatggcaattctattagatatgcccctgcgagatgtcgaacaaatcgtttat
ttcaacgcctatgttgtcctcaatcccggtaatgccgaaaaacttcaatacaagcaattg
ctcacggaagatgcttggctggaaatagaagacgaactttacagcgaagattccacgctg
acgggcgtagaagtaggcataggtgctgaagctttgcaagttttgctgcaaaatattccg
ctagaaagtgaagcggaaaagctgcgggaagatattgctaatgctaaaggtcaaaaacgg
gcaaagttaattaaacgcttgcgggtaattgacaacttcatcgctacgggctctcaaccc
gattggatggtgctcaatgtgattccggtgattcccccggacttgcggccgatggtgcag
ctagacggcgggcgttttgcaacgagcgacctcaacgacctctatcggagagtaatcaac
cgcaacaaccgcttggcgagactgcaagaaattctggcgccggagattatcatccgcaac
gaaaagcggatgctgcaagaagctgtggatgcgctgattgacaacggtcgccggggccgc
acggtggtgggggcaaacaaccgcccgctgaagtcgctgtcggacatcattgaagggaaa
caaggccgcttccggcaaaacttgctggggaaacgggttgactactccgggcgttcggtg
attgtggtggggccgaaactgaaaattcaccagtgcggtttgccgagggaaatggcgatc
gaacttttccagcctttcgtcatccaccgcttgatccgccaaggattggtcaacaacatc
aaagctgccaaaaaactcatccagcgcaacgatcccagcgtttgggacgtgcttcaggag
gtgattgaaggacacccggtgatgctgaaccgggcgccgaccctccaccgtttggggatt
caagcctttgagccgattttggtggacgggagggcgattcagcttcacccgctagtctgt
ccggcttttaacgctgactttgacggcgaccaaatggccgtgcacgtgcctttgtctctg
gaatctcaggcggaagcgcgcttgctgatgctggcttctaacaacattatgtcgcctgca
accggaagaccgatcgttactccttctcaagatatggtgctcggttgctattacttgaca
gccgaaaatcctgacgctcaaaaaggagccggtcactatttctccaaccttaccgacgcg
gttgtagcttacgaacaaggaatcgttgacttgcactcttatgtgtgggtgaggtttcaa
ggcgccatagaaaacacagaacctgaaggagaaccgctgaaggtggaacgctctaccgac
ggtatagtgaccaaagaatacaagttccgccgggttcgggaagacggagagggcaaggtg
ctcaatcaatttattcgcactactccgggcaggattatctatcaccaaaccatcgaatcg
gtaattaacaattag
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integrated database retrieval system
