Oscillatoria nigro-viridis: Osc7112_5754
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Entry
Osc7112_5754 CDS
T02375
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
oni
Oscillatoria nigro-viridis
Brite
KEGG Orthology (KO) [BR:
oni00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Osc7112_5754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oni03021
]
Osc7112_5754
Transcription machinery [BR:
oni03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Osc7112_5754
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AFZ09965
UniProt:
K9VRX0
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Position
complement(6896267..6897433)
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AA seq
388 aa
AA seq
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MIQANTVLKTTITPEMETIELLRGAESVLPESELELFIDEEDDREEFLDSQSEDDPKSGK
GAKARRRAQAKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVREQLLE
EYNREPKDSEWANAVEMALPAFRHRLHVGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQD
LIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRI
KKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFI
ESDGETPEDQVSKNLLREDLESVLDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTR
ERIRQIEAKALRKLRHPNRNSILKEYIR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgatccaggctaacaccgtactcaaaaccacaattacaccggaaatggaaacaatcgag
ttgcttcgcggcgccgaaagcgttctacctgagagtgagttggaactctttatcgacgaa
gaagacgatcgagaagaattcttagactctcaatctgaggacgaccctaaatctggcaaa
ggcgcaaaagcccgccgtcgggctcaggcaaagaaaaagcattatactgaagactctatt
cgtctttacctgcaagaaatcggtcggattcgactgctgcgagctgacgaagagattgaa
ctagcgcgcaagatagcagatttgctggaattagagcgagttcgagaacaactgctcgaa
gagtataaccgcgaacccaaagacagcgaatgggcgaatgctgtagagatggcacttcct
gcattccgtcaccgactccacgtcggccgtcgggccaaggaaaaaatggtgcaatcaaac
ctgcgtttggtggtgtcgatcgccaaaaaatacatgaatcgcggtttgtctttccaagat
ttgattcaggaaggctctttgggtctgatccgggccgctgaaaaattcgatcacgaaaaa
ggctacaagttttctacctacgcaacttggtggatacgtcaagccatcacccgggcaatc
gccgaccaatcccggactatccgcctgccggttcacctttacgaaaccatctcgcggatc
aaaaaaactaccaaactcctgtctcaggaaatgggtcgcaagcctacggaagaagaaatt
gctacgcgcatggagatgacgatcgagaagttgcgattcattgctaagtccgcacagttg
cccatctctttagaaactccgatcggcaaagaagaagactcgcgtctgggagactttatt
gaatctgacggggaaacgccagaagatcaagtctcgaaaaacttgctcagggaagacttg
gaaagcgttttggatactctcagcccccgagaacgggatgtactgcggctgcgctacggc
ttagatgacggacggatgaagaccttggaggaaattggtcaaatctttaacgtcacccgc
gagcggattcgccaaatcgaggctaaagccctgcggaagttgcgccatcccaaccgcaac
agcatcttaaaagaatatatccgctag
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