Oreochromis niloticus (Nile tilapia): 100534588
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Entry
100534588 CDS
T06104
Symbol
nr3c1
Name
(RefSeq) glucocorticoid receptor isoform X1
KO
K05771
glucocorticoid receptor
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100534588 (nr3c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100534588 (nr3c1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
onl03310
]
100534588 (nr3c1)
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
100534588 (nr3c1)
Nuclear receptors [BR:
onl03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
100534588 (nr3c1)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
GCR
Motif
Other DBs
NCBI-GeneID:
100534588
NCBI-ProteinID:
XP_003446987
Ensembl:
ENSONIG00000008483
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Position
LG10:20104465..20162370
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AA seq
803 aa
AA seq
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MDQGGLKRNGNRDDGLTFAEIGGTGDTPGSLFQSAMHLPGSLPPATVAPNRQGGTNGQGE
LGGLFESHQHHVLGEGTDMKESKMIRMQKQQQQQQQDIGIFGMGDSLPLFNQCISDTPTS
VINTSDTSVLGNLPLPDLFSHPIKTESILSLDKDLGTYSGHTGTGLCDLDGNSGRLIEDT
EIWQDLDLPSSLPEISAFELDSEVAHLDNILQESAGGGCPVSGLPKEIKPLMGNGENCTS
VNGTEQQHHALHPHQQQQQQQHHQLIHHQQHQPQHHQPQALLSTVIIKEEKDPDESFIQI
CTPGVIKQEKQDSAFCQPQCLQSSISSLQGGGPGPMSSPVGVGAVPGYHYRANPSSTMGI
QDQKPFDMYSNMPLMGDGWARGKRYGETSGIQSSDDGLTPVASLAPFSVGFSSSSPREGE
ISSSVVPAQSKTSGQTHKICLVCSDEASGCHYGVVTCGSCKVFFKRAVEGWRARQNTDGQ
HNYLCAGRNDCIIDKIRRKNCPACRFRKCLQAGMNLEARKNKKLIKMKVHRAGASEPTIS
NMPVPVVPRSMPQLVPTMLSILKAIEPEIIYSGYDSTLPDTSSRLMSTLNRLGGQQVVSA
VKWAKSLPGFRNLHLDDQMTLLQCSWLFLMSFSLGWRSYEQCNGSMLCFAPDLVINKDRM
KLPFMTDQCEQMLKICNEFVRLQVSYEEYLCMKVLLLLSTVPKDGLKSQAVFDEIRMTYI
KELGKAIVKREENPSQNWQRFYQLTKLLDSMQEMVEGLLQICFYTFVNKTLSVEFPEMLA
ELISNQIPKFKDGSVKALLFHQK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggatcagggtggactgaagcgcaatggtaatcgagacgacggcctgacatttgcggag
ataggaggtactggtgacacacctggttcactgttccagtctgcaatgcatctgcctggg
tctctgccccctgccacagtggcccccaatagacagggtggaaccaatggccagggggag
cttggaggcctgtttgagtctcatcagcatcatgttctgggtgaggggacagacatgaag
gagagtaaaatgattcgaatgcagaaacaacaacagcagcagcaacaggatattggtata
ttcggcatgggggacagcttgccattgtttaaccagtgtatttccgatacacccacatct
gtcatcaacacctcagacacttccgtcctaggcaaccttcctctgcctgaccttttttcc
caccccataaagacggaaagcattctttctctggacaaagacttgggaacatatagtggg
cacacaggcactggtctatgcgatttggatggcaacagtggccgcctgattgaggataca
gagatttggcaagatctggaccttcccagctcactgccagaaatcagtgcttttgagttg
gattcagaagtggcacacttggataacattctacaagagagcgccggtggtggctgtcct
gtcagtggcttgccaaaggaaataaagcctctcatgggtaacggagaaaactgtaccagt
gttaatggcacagagcagcaacaccatgccctacacccccatcaacaacagcagcagcag
cagcaccaccaactaatacatcaccagcaacatcagccccagcatcaccagcctcaggcc
cttctctccactgtcatcatcaaggaagaaaaggatcctgacgagtctttcattcaaatc
tgtacccctggtgtgataaaacaggagaagcaggatagtgctttctgccagcctcagtgt
ctccagagcagcatcagttctctccagggaggaggaccaggccccatgtcctcccctgtg
ggtgtcggagcagtgcccggctaccactacagagccaacccgagctcaacaatgggcata
caagaccagaagccttttgacatgtactcaaacatgcctctgatgggggatggctgggcc
cgggggaaaaggtatggagagacatctgggattcagagcagcgatgatgggctcactcct
gtcgcgtccttggcacctttttctgttggcttctccagttcatcacccagagaaggagag
atcagcagctctgtggtacctgcccaatccaagaccagtgggcagactcataagatctgt
ttggtgtgctcagatgaggcctctggatgccattacggggttgtaacatgtggcagctgc
aaagttttcttcaagagagccgttgaaggatggagagcacgacaaaacacagatggccag
cacaactacctgtgtgcagggagaaatgactgcatcattgataagatccgcaggaagaac
tgtccagcctgccgcttcagaaaatgtcttcaagctggaatgaacttggaagcaaggaaa
aacaaaaagctgatcaagatgaaagtgcaccgggctggggcatcagagcccaccattagc
aacatgcctgttccagtcgtacccaggagcatgccccaactcgtgccgaccatgctgtcc
atactgaaggccatagaaccagagatcatctactcgggctatgacagcacactgccagat
acttcatcacggctcatgtctactctcaacaggctagggggacagcaggttgtctctgca
gtcaagtgggccaagtcactaccaggcttccgcaatctgcaccttgatgaccagatgact
ctgctgcagtgctcctggctctttctcatgtctttcagtcttggctggaggtcatacgag
cagtgtaatggcagcatgctttgtttcgcccctgatcttgtcatcaacaaagatcgcatg
aagctgcccttcatgactgaccagtgcgagcagatgctgaagatctgtaatgagtttgtc
agactgcaggtgtcctatgaagagtacctgtgcatgaaggtgctgttactgctcagtaca
gtaccaaaagatggcctgaagagccaagcagtttttgatgagatcaggatgacctatatc
aaggagctgggaaaagccatcgtcaagagagaggagaaccctagtcagaactggcaacgc
ttctaccagctaactaagctactcgactccatgcaggagatggtcgagggtcttctccag
atctgtttctacacctttgtgaataaaaccctcagtgtggaattcccggagatgctggca
gagctcatttccaaccagataccaaaattcaaagatggaagcgtcaaagctctgctgttt
catcagaaatga
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