Oreochromis niloticus (Nile tilapia): 100689873
Help
Entry
100689873 CDS
T06104
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X2
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100689873 (smarce1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
100689873 (smarce1)
03036 Chromosome and associated proteins [BR:
onl03036
]
100689873 (smarce1)
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100689873 (smarce1)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100689873 (smarce1)
PBAF complex
100689873 (smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Pcf11_helical
DUF5358
AnkUBD
CxxCxxCC
Motif
Other DBs
NCBI-GeneID:
100689873
NCBI-ProteinID:
XP_003454672
Ensembl:
ENSONIG00000009004
LinkDB
All DBs
Position
LG6:39060633..39075706
Genome browser
AA seq
436 aa
AA seq
DB search
MSKRPSYAPPPPPAPTTQMPNTTGFVGYNPYSHLAYNNYRLGGSQSSNSRNSSGINIPKP
PKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNDYEAE
KIEYNESMKAYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKDEPYMSIQPAEDPDGD
ETVTADRVKDYDDGFSIKHLAAARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQV
QSLMVHQRKLEAELLQIEDRHQDKKRKFIEATESFTNELKRLCCMKVEVDMEKISAEIAA
AEEAARKRMAEREKDAGDRGAREAPTCVLAEEDKHICATHGNKPQQNSLSEGSNKEGEET
ESSTTDAPGKPKTSEELEAHPGSEEGASEDKESVPEGAMEEGTSDSNTGSETTSAQTEDA
TTSEPSEGPSRARAAH
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaggccatcctatgcccctccacctccccctgcccctacaactcaaatgccc
aacaccaccgggtttgtggggtacaacccatacagccatctggcctacaacaactacaga
ctgggagggagccaaagcagcaacagtcggaattcctctggaataaatatcccaaagcca
cccaagccacccgataagccactgatgccatatatgagatacagtcgcaaggtttgggat
caagtaaaagcctccaatcctgatctgaagctatgggaaattgggaagataatcggtggc
atgtggagggacctcactgatgaggagaaacaggattatttgaatgactacgaagcagag
aagattgagtataatgagagcatgaaggcctatcacaactcgcctgcctacctggcctac
gtgaacgcgaaaagccgggccgaggcagctctggaagaggagagtcgccagaggcagtcc
aggctggacaaggatgagccttacatgagtattcagccagcagaggatccagatggggat
gagaccgtcacagctgacagagtaaaagattacgacgacgggttttctataaagcacttg
gccgcagctcgtttccaacgcaaccaccgtctgatcagcgagatcctcagcgagagcgtc
gttcctgacgtgcgatccgtcgtcacgaccgctcgcatgcaggtcctcaaacggcaggtc
cagtccctgatggttcatcagagaaaactggaggcagagttgcttcagattgaagaccgc
catcaggacaagaagagaaaattcatcgaagccacagagtcgttcacaaacgagctcaaa
aggttgtgctgcatgaaggtggaggtggacatggagaagatttctgcagagattgctgca
gcagaagaagcagcccgcaaacgtatggcagaacgtgagaaggatgcaggagatcgaggt
gcaagagaggccccgacctgcgtgctggcagaggaagacaaacacatttgtgcaacacat
ggcaacaagccccagcaaaactctctgagcgagggcagcaacaaggaaggcgaggagacc
gaatccagcactacggacgcaccagggaagccaaagacctcagaggaacttgaggcccac
cccggcagcgaagagggggcgtcagaggacaaagagagcgtcccagagggagccatggag
gagggaaccagtgacagcaacacgggttcagaaaccacctccgctcaaacggaagacgcc
acgactagcgagccatcggaggggcccagcagggcgcgagcagcccactaa
DBGET
integrated database retrieval system
