Oreochromis niloticus (Nile tilapia): 100689874
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Entry
100689874 CDS
T06104
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X2
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04010
MAPK signaling pathway
onl04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100689874
04020 Calcium signaling pathway
100689874
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100689874
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100689874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GRP
Trm112p
Motif
Other DBs
NCBI-GeneID:
100689874
NCBI-ProteinID:
XP_013132865
LinkDB
All DBs
Position
LG4:complement(12990344..13114794)
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AA seq
2515 aa
AA seq
DB search
MTDGEGRARFQYAECQELEEVREEVRLAVPTSYRNYAQGHEDDPGGRRPDDEEEEEEVER
TRRSSRRRRRRRSSSSSVQGDGGNEWSPEVQGDEEQEPELEVEVGPTLGVRITAPIRDPD
CVSEDEEQQPYPALAPVAFFCLKQTTRPRNWCLRMVCNPWFEHVSMLVILLNCVTLGMYR
PCEDVSCKSEWCRILQVLDDCIFAFFAVEMVIKMVALGIFGSKCYFDDKWNQLDFVIVMA
GMLEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVF
FIFGIVGVQLWEGLLRNRCFLPDAMSNMSLNSYYMSEEGEDSPFICSAPRENGMRRCKDV
PPSSKDGLECTLPASVVIREGAASGNFCVNWNQYYNVCRPGELNPHKGAVNFDNIGYAWI
AIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRE
NALMREQRARYMSNDSTLASYSEPGSCYEEMLRYISHLYRKLTRRLQRIYSGWHSKRRKK
VNPNGSGGGSNGGGNGHGHGSSRGCGGSGPGNALWLRPIHNLLQHHQHQHCRLSNGGQHT
VSVATAEHVDRGGHIKVGEELEMKSLTVRRGSANGNSDNPTAVTQRVGSLLGRLNGGMNY
PTILPSFVCSYSSKTPPPHSKQCGSCPEHPPNHPASEHAETLTKLYQLMGQHSRQRLLYQ
LAGMVPSPLLLELLSCPLCASSLETLELELGDLEGGKGEADGLHDFPQGADVRGVRGRSR
RRGVVEYENGVVRAWRDLREKLKRIVESKYFNRGIMIAILVNTLSMGIEYHEQPEELTDV
LEISNIVFTSMFVLEMGFMLLAFGLFGYIRNPYNIFDSIIVIISVWEIIGQADGGLSVLR
TFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFSFR
TENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNY
VLFNLLVAILVEGFQAEGDANRSESDDDKKSDNFDEDEKIEQFRDTELKLSLMMTGNGHI
DPRGSMAPPIIMRTAATPMPTPKSSLGPESILGDELMYMDGVPQYNEAGLGFPEAGVGHP
ESRRGSSTSVEPYDPPSLSLSSPGRRSPLPPRGSGSSWGSRRSSWNSLGRAPSLKRRDTS
GERESLLSGEGGEDEDARDGKVEAGGNNRLKPGSLELLQASTLCPSVVADYGDCNGRTVT
YNPNVNSDPKEDSSPEDDLDDDGSFCYWIRKKFHNMKPRWCKEHEDWALYLFSPENPFRM
WCQKVISHRLFDHIVLVFIFLNCITIALERPDIKNDSTERHFLSVSNYIFTVIFLAEMAI
KVVALGFCFGKQSYLQSSWNILDGVLVFVSLIDILVYLAYHGENKILGILRVLRLLRTLR
PLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYHCDGQDTR
NITNKSDCVQANYRWIRKKYNFDNLIQALMSLFVLSCKDGWVTIMYDGLDAVGVDQQPKR
NNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRIKMKEKKR
RKAKLGRYYDDYSPLRLSIHSLCTSHHLDLFITFIICVNVFTMSIEHYKQPVYLGEVLKY
CNYVFTCIFVVEALLKLVAFGIHRFIRDRWNQLDLAIVALSIMGIVLEELKMKGTLPINP
TIIRIMRVLRIARVLKLLKMATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELF
GKLDCSDENPCEGLGRHATFRNFGMAFLTLFRVSTGDNWNGIMKDTLRECHPSDEHCLPY
LPWVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKDAKEDAEMDAEIALEMDRERERR
LSTNSNNSSVGGTYVGPCSNSPEEEEEVQYNDQNLLSSKISVSRMHSLPNDSYMFRPVRP
ASAPYTLDEVDLSPQHQHSVSVMSVHSQPCESHSLLQVPDISPVHPRSPPSLSLPRIAPP
TPSPSPRALHRQVALKVDSVESQGFEQQERPSSVHLPPLSPSQLPPHSSSSSSSPLPPPP
SSPSAFPRYRPSPLPPLLSSPSSLPPPPSSPSLLLPPPPSPRAPLRPASLRRPRPPSAIS
LCDPADEEVYHITSSARHRWWDGEGGGTESRVKVGRSHSLSPYTLPSALDSYSSTSSPPP
PPLPPSSSRSALSLLGAGLKDRDFRKGFSIDNQGFLDKPPSLNAGYADDQRRHSIEVCLP
RAGTTSSNEHFTEEAYRLEKGGPVRVQSVRSNHRKKKMSPPCISIHPPSEREHAQTASPP
KLSDCSTMLRRRTPSYDLTPHMQSNTNAQDASSDANTQSPMHRSLTPVHVPMRANSPTRA
LAHSRPSTPTRTQTHTPPHASTPTHPHIPISPNIFIQPHAPLVPSAMPFSQTHPVSPAAG
HIPLPQFTFDQPQSRYMSGLSAGISDTDTATCSSPFDGRLGSGAGFSAKNRRTAQ
NT seq
7548 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaagggagagcgcgctttcagtacgcagagtgccaggagctggaggag
gtgcgggaggaggtaaggcttgctgtaccgacatcctacaggaattacgcccaaggtcat
gaagatgacccaggaggaagacgcccggatgatgaggaggaagaggaggaggtggagagg
acgagaaggagcagcaggaggaggaggaggaggaggagcagcagcagtagcgttcaagga
gatggaggaaatgaatggagtcctgaagttcagggggatgaagaacaggaaccggagctg
gaagtggaagttggaccaacactgggagttcgcatcacggctcccatccgtgatccagac
tgcgtctccgaggatgaggaacagcagccgtatccggccctggcccccgtggccttcttc
tgcttaaagcaaacaacgaggcctcgcaactggtgtctccgcatggtctgtaacccgtgg
tttgagcacgtgtccatgttggtgattctgctcaactgtgtgactctggggatgtatcgg
ccctgtgaggacgttagctgcaagtcagagtggtgtcgcatcttacaggtgttggatgac
tgcatcttcgctttctttgcggtggaaatggttatcaagatggtggccctgggaattttt
ggctccaagtgttactttgatgacaagtggaatcagcttgactttgtcattgtcatggca
gggatgttggagtattccctggatggccacaatgccagtctgtcagctatccgtaccgtc
cgagtactcaggccactgcgggctatcaacagagtaccaagtatgaggatcttggtgacg
ctgctgttagacactctgccgatgctgggaaatgttctgctcctctgcttcttcgtcttc
ttcatcttcggcattgtgggagtccagttgtgggagggactgctgcgcaatcgctgcttc
ctgccagatgcaatgtccaacatgtctttaaattcttactacatgtctgaggaaggtgaa
gacagcccgtttatctgctcggctccacgcgaaaacgggatgcggcgttgcaaagatgtg
ccaccctcctctaaagacgggctcgaatgcacattgccggcttcagttgtgattagggag
ggcgcggccagcggtaacttctgtgttaactggaatcagtactacaacgtctgccgccca
ggggagctcaaccctcacaagggagctgtcaactttgacaatatcggctatgcttggata
gccatattccaggtcatcacactggaaggatgggtagacatcatgtactatgtcatggat
gctcactccttctataattttatatattttatactgctcattattgtgggctctttcttc
atgatcaacttgtgcctcgtggtcatcgccacccagttctccgagacaaagcaaagggag
aatgcactgatgcgggagcagcgtgctcgttacatgtcaaacgactccacacttgccagt
tacagcgagccgggctcgtgctatgaagagatgctacgctacattagccatctttaccgc
aagttaacacgcaggctccagaggatatactctggctggcacagtaaacgtcgtaaaaag
gtgaatcctaatggcagtggtggaggcagtaatggtggcggtaatgggcacggccacggt
tccagcaggggctgtggagggtcaggcccaggtaacgcattgtggttgaggccaatccat
aaccttttacaacaccatcagcatcagcactgtcgcctcagcaatggcgggcagcacacc
gtcagtgtggcaaccgcagagcacgtggacagaggaggacacatcaaagtcggggaggaa
ctggagatgaagtcgcttaccgttcggaggggaagtgcaaatggaaacagcgataacccg
accgctgtcacccagcgcgtgggctcattactcgggcgactgaacggggggatgaactat
cccaccattctgccgtcttttgtgtgcagctatagcagcaagacgccaccccctcactca
aagcagtgcggctcttgtccagagcatccgccgaaccacccggcttctgagcacgccgag
acactgaccaagctttaccagctcatgggacagcacagtcgccagcggctgctctaccag
ctggcgggtatggtgcccagccctctcctcttggagctacttagctgccctttgtgtgcc
agcagcctggagaccttggagctggaactgggagacctagagggaggcaagggagaggca
gatggactacacgacttccctcagggggccgatgtgagaggagtgaggggtcggagcaga
cgccgtggggttgttgaatatgaaaatggagtggttcgtgcctggagggacctcagggaa
aaactaaagaggattgtggaaagtaaatacttcaaccgcgggatcatgatcgctattctt
gtcaatactctcagcatgggaatagagtaccacgagcagcccgaggaactgactgatgtg
ttagagatcagcaacatcgttttcaccagtatgtttgtcctggagatgggtttcatgctg
ctggctttcggcttgtttggatacatcaggaacccatacaacatctttgacagcatcatt
gttatcatcagtgtgtgggagataattggccaagcagacggtgggctgtcagtcctgcga
acgtttcgtctgctacgagttctgaagctggttcgcttcctacccgctctgaggagacaa
ctcgtagtgctgatgaagacaatggacaatgtggccaccttctgcatgcttctcatgctt
ttcatcttcacttttagtatcctgggcatgcatctttttgggtgtaaatttagttttcgc
acagagaatggagataccatccctgaccgaaagaactttgacagtctgctctgggccatt
gtcactgtgttccagattcttacccaggaggactggaatgtggtgttgtataacggcatg
gcttctacctctccatgggcggctctctacttcgttgctcttatgacatttggcaactat
gtgctcttcaatttactagtggccatcttggttgaaggcttccaggctgagggtgacgct
aatcggtcagagtcagatgatgacaagaaatcagacaactttgatgaggacgagaagata
gaacagttcagagacacggagctaaagctctcactgatgatgacaggtaatggtcacatt
gaccctcgtggctctatggctcctcccataatcatgcgcacagcagccacacccatgcct
acacctaagagctcccttggacctgagtccatcctcggggatgagctcatgtacatggac
ggagtacctcaatataatgaggcaggactgggttttcctgaggcaggggtcggtcaccca
gagtcccgacggggaagctcaacatcagtggagccatatgatccgccttctctgagcctc
tctagtcccgggcggcgttctcctcttcctccccgcggctctggaagctcatggggaagt
cgacgctccagctggaacagcctgggaagggcaccgagcctcaaaaggcgagacaccagc
ggagagcgggagagcttgttgtctggggaaggtggagaggatgaggatgccagggatggc
aaagtggaggcagggggaaacaacagactaaagccggggtccttggaactgctgcaggcg
tctactctctgcccttctgtggtagcagactatggtgactgcaatgggaggaccgtgacc
tacaacccgaatgtgaactccgaccccaaagaagactcctccccagaggacgatttggac
gatgatggttctttttgctactggatcaggaagaagttccataacatgaagccccgatgg
tgcaaagagcatgaagactgggcgctgtacctgttctctccagagaatccgttccgtatg
tggtgccagaaagtgatctctcacagactgtttgaccacatagttctagttttcatcttt
ctcaactgcatcaccattgctctggaaagacctgatataaaaaatgacagcacggagcga
catttcctgagtgtgtccaactatattttcactgtgatcttcctagcagagatggccatt
aaggttgtagctcttggtttctgctttgggaagcagagctacctccagtccagttggaac
attctggatggtgtattggtgtttgtgtctctgatcgacattttggtttatctggcctat
catggtgaaaacaagatcctgggaattctgagagtacttcgcctgctacgaacacttcgc
ccactgagggtgatcagtcgagccccaggattaaagcttgttgtggagactctcatcacc
tctcttagacctattgggaacattgttttgatatgctgcgccttcttcattatctttgga
atcttgggggtccagctgttcaaagggaagttctaccactgtgacggtcaggacacaaga
aacatcaccaacaaatcagactgtgtgcaggctaactaccgctggatacgaaaaaagtac
aactttgacaacctgattcaggctctgatgtctttgtttgtgctgtcgtgtaaggatggc
tgggtaaccatcatgtacgatgggctggatgcagtaggagtggaccaacagcctaaaagg
aacaacaatccttggatgctcctctactttatctccttcctgctcatcgtcagcttcttc
gtccttaatatgtttgttggggttgtggtggagaacttccacaagtgccgacaggaccag
gaagaggaggaggcacgcctacgggaagagaagaggatcaaaatgaaagagaaaaagcgc
aggaaggccaagctcgggcggtactatgacgactactctcccctgcgtctgtccatccac
tcgctgtgtaccagccaccacctggacctcttcatcacttttatcatctgcgtcaatgtc
ttcaccatgagcatagagcactataaacaaccagtgtatttaggagaggttctgaagtac
tgtaactacgtgtttacctgcatcttcgtcgttgaggccctcctcaaacttgtggcgttt
ggcatacacaggttcatcagagacaggtggaatcagctggatttagctatagtggcattg
tccatcatgggcatcgtcctggaggagctgaaaatgaaaggcacattaccaataaatcca
accatcatcaggatcatgagagtgctcaggatagcacgagtgctgaagcttctaaagatg
gccacagggatgagagctctgttggatactgtcatgcaagcactgccgcaggtgggaaat
cttggtcttctcttcatgctgctcttcttcatctatgctgctctgggagtggagctattt
ggcaaactggattgcagcgacgaaaacccatgtgagggtctgggtcgtcacgcaaccttt
agaaattttgggatggccttcctcacactgtttcgagtgtccactggagacaactggaat
gggattatgaaagacacattgagggagtgtcacccgtctgacgaacactgtttaccatat
ctgccctgggtctctccaatttacttcgtcacctttgtgctcatggcccagtttgttctg
gtcaatgtggtggtggctgttctgatgaaacatctagaggaaagcaacaaggatgctaaa
gaggatgcggagatggatgcagagatcgccttggaaatggatagggagagggaacgcaga
ctaagcacaaattccaacaacagctcagtcggagggacctatgtggggccatgctcaaat
tcacctgaagaggaggaagaggtgcagtacaacgaccagaacctgctgtcatccaagatc
tctgtatccaggatgcattctctgccaaatgacagttatatgttcagaccggtgcgaccc
gccagcgccccctacactttagacgaggtagacctgagtccccaacaccagcattcagtc
tcagtgatgtcggtccactcccagccctgtgagagccactctctgctccaggttccagac
atttcccccgttcaccctcggtcacctccatccctgtctcttcctcgcatcgccccgcca
acacccagcccctcaccacgggctctgcataggcaggtggcgcttaaagttgattctgtg
gagtcgcagggttttgagcaacaggagaggcccagctcagtccatctgccccccctgtcc
ccttcacagctacctcctcattcatcctcctcctcgtcatcacccctgcctcctcctccc
tcctccccctctgccttccctcgttatcgtccttctcctcttcctcctctgctgtcttcc
ccgtcttctcttcctccgccgccgtcctccccctcactgcttctccctccacctccctca
ccccgtgcccccttgaggcctgccagcctccggagaccaaggccgccctccgccatctcc
ctctgtgacccggctgacgaggaggtgtatcacatcaccagctctgcccgccacaggtgg
tgggacggggagggaggtgggacggagagccgggttaaagtgggccgcagccactccctc
tccccgtacaccttgccgtccgccctcgactcctactcctccacctcctctcctcctcct
cctccgctgccaccgtcctcatcgaggagcgcactgagcctgcttggagccggactgaag
gaccgggacttcaggaaaggcttcagcatcgacaaccagggcttcctggacaagccgcca
tcactgaatgccggatacgccgacgaccagcggcgtcactctatcgaggtctgcctcccg
cgggctggaacaaccagctctaatgaacacttcacagaggaggcctaccggctggagaaa
ggcggtcctgtgagagtgcagtctgtcaggagcaaccacagaaagaagaagatgagtcct
ccatgtatatccattcacccaccctcagagagggagcacgctcaaaccgcctcgcccccc
aaattatctgattgcagcacgatgctgagacgcaggacaccgtcctacgacttgacgcca
cacatgcaatcaaatacaaacgcccaagacgcgtcatcagatgcaaacacgcagtctcca
atgcacagatcgctaacgcctgtccatgttcctatgcgagcaaactcgcccactcgggca
ctggctcactcgcgaccgtctaccccaacgcgcactcagacacacaccccgccgcacgcc
tccacgcctacacacccacacatccccatcagcccaaacatctttatccagcctcacgcc
cctctcgtcccaagcgctatgcctttctcacagacacaccctgtctcccctgctgcgggg
cacatccccctccctcagttcaccttcgaccaaccgcagtccagatacatgagcggccta
tcagctggcatatcagacaccgacacggccacctgctcttcccctttcgacggcaggctg
ggaagcggcgcaggattcagtgcaaagaatcggaggaccgcccaataa
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integrated database retrieval system
