Oreochromis niloticus (Nile tilapia): 100689892
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Entry
100689892 CDS
T06104
Symbol
katnb1
Name
(RefSeq) LOW QUALITY PROTEIN: katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
onl04812
]
100689892 (katnb1)
Cytoskeleton proteins [BR:
onl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
100689892 (katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
RMC1_N
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
PROPPIN
Beta-prop_IP5PC_F
Beta-prop_LRRK2
Tricorn_2nd
VPS8_N
Ge1_WD40
Beta-prop_NUP159_NUP214
Beta-prop_ACSF4
Beta-prop_IFT122_2nd
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
100689892
NCBI-ProteinID:
XP_003437792
Ensembl:
ENSONIG00000003323
LinkDB
All DBs
Position
LG1:37939280..37956787
Genome browser
AA seq
761 aa
AA seq
DB search
MTSAEVRCVIQLLSCSRAVNGPSTSCCRRLTGSTLSRPPVTDRRSRGPVIKHSSQSPSMT
SMAASSTTKIAWRLQEFEAHFSSISCLALGKSSGRLLATGGEDCRVNIWAVSKANCIMSL
TGHKNPVECIHFNVSEEQVVAGSQSGSIRVWDLEAAKILRTLMGHKANITSLGFHPFGDF
LASSSMDTNIKLWDVRRKGYVFRYKGHTQAVRSLAFSPDGKWLASASDDCTVKLWDLAQG
KTITEFKSHTAPVNIIQFHPNEYLLASGSSDRTIKLWDLEKFTMIGSLEGDTTPVRCICF
SPDGSCLYSGATDSLRVFGWEPDRCFDAVSVGWGKVSDVAICNQQLIGVSHQLSNVSSYV
VDLKRVKKSGGAVIQGIIQDNQPLTEPKKDPKGAALRKNYERPTTTCRSQRLKHRSESDR
RSPEGERRSPSEDEADEKLSSAEIHNAEDYKAIFQPKNAISRTPPKMSEPFPAPPEDESI
LAISRQLKDMKSPFPDKQQGPPLAASTPVVRVEPTVISAVKRPSPPAAGTASSSHPASTH
APTQPPSPRPNPNRLKIISSARNEPIGLNVADFLPSSPNHRSGALSDEEALTQMKKGHET
MCVMLSSRLKNLQTVRGVWTRDGIKIALDTAISMSDPSIVVDILNIINPQPSLWKLDVCM
TVLPQLDKLLQSKYESYIQTGCTSLKLVMKHFWTLISDTLKATPSVGVDITREERHQKCR
VCCKQLKNLSNIVKNKATQVGRHGSTFKELQLLMAPLDDSP
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagcggaagtgaggtgtgtgattcagttgctaagctgcagccgagcagtaaac
ggaccgtcaacaagttgctgtcgccgtcttactggatcaactttaagccgtccgccggtg
accgacagacggagccggggtccagtcatcaaacacagcagccaatctcccagtatgacc
agtatggctgcctccagcaccaccaagatcgcatggcgccttcaggagttcgaggctcac
ttcagctccatttcctgtctggctctggggaaaagctcaggccgcctgctggccacagga
ggagaggactgcagggtcaacatctgggccgtcagcaaggccaactgcatcatgagtctg
actggtcacaagaacccagtggagtgtatccatttcaacgtgtcggaggagcaggtcgtc
gccgggtcgcagtctggttcaatacgagtctgggacctggaggctgccaagattttaagg
actctgatgggacacaaagccaacatcaccagcctgggcttccatccctttggagacttc
ctggcctccagctccatggacacaaacattaagctgtgggacgtgcggaggaaaggatac
gtgttcaggtataagggtcacactcaagccgtgaggagtttggccttcagtcctgatggg
aagtggttagcttcagcgagtgacgactgcaccgtcaagctgtgggacctggctcagggg
aaaaccatcacggaattcaaatctcacaccgcccccgtcaacatcatccagtttcacccc
aacgagtacctgctggcctccggaagctccgacaggaccatcaaactgtgggatttggag
aagtttacgatgattggctcgttggagggcgacacgactccagtcaggtgtatatgtttc
agcccagatggctcctgcctgtacagcggcgccacggactcgctgcgggtcttcggctgg
gagccggaccgctgcttcgacgcggtgtcggtgggctgggggaaggtttctgacgtcgcc
atctgcaaccagcagctgatcggcgtgtctcaccagctgtcgaacgtgtcgtcctacgtg
gttgatctgaagagggtaaagaagagcggtggcgccgtgatccaggggatcatccaggac
aaccagccgctcacagagccgaagaaggaccccaaaggagcggcactgcgaaagaactac
gagagacccacgaccacctgcagatcgcagaggttgaagcaccgttcagagtctgacagg
cggagccccgaaggcgagaggcggagccctagcgaggacgaggcggatgagaagctgtcg
tctgctgagatccacaacgctgaggactacaaggctatcttccagccaaagaacgccatc
tctcgcactcctcctaagatgtcggagccttttcccgctcctccagaggacgagtccatt
ttggcgatcagccggcagctgaaggacatgaagtctccttttcctgataaacagcagggt
cctccgctggccgcctccactcccgtggtgagggtggagcctacggtcatttccgctgtg
aagcgtccgtctcctccagctgcgggcacggcatcctccagtcaccccgcctccacccac
gctcccacccagcccccgtcaccacggccaaatccaaaccggcttaaaatcatctcgagc
gccaggaacgagcccatcgggctgaacgtggccgacttcctgccctcttcacccaaccac
agatctggagccctgagtgacgaggaggccctgacccagatgaagaagggtcacgagact
atgtgcgtgatgctgagcagccgactgaagaacctgcagacggtccgaggggtgtggacc
cgagacggcatcaagatcgctcttgacaccgccatctccatgagtgatccgtccatagtc
gtggacatcctgaacatcatcaacccccagccatctctgtggaagctggacgtgtgcatg
accgttcttcctcagctcgacaaactgctgcagagcaagtacgagagctacatacagacc
ggctgcacgtctctgaaactcgtcatgaagcacttctggacgctgatctcggacactctg
aaggccacgccatccgtcggggtcgacatcacacgagaggagcgacaccagaagtgccga
gtgtgctgcaagcagctgaagaacctgagcaacatcgtgaagaacaaggcgacgcaggtc
ggtcgtcatggcagcaccttcaaagagctgcagctgctcatggcgccgctcgacgactcg
ccctga
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integrated database retrieval system
