Oreochromis niloticus (Nile tilapia): 100689995
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Entry
100689995 CDS
T06104
Symbol
rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100689995 (rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
onl03310
]
100689995 (rora)
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100689995 (rora)
Nuclear receptors [BR:
onl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100689995 (rora)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100689995
NCBI-ProteinID:
XP_003440478
Ensembl:
ENSONIG00000015289
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Position
LG7:complement(52393256..52582336)
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AA seq
519 aa
AA seq
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MESPPDPASDPGNSASEPATPVRETPVNLETLRKADHPAPVRRQTCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
SYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccagatccagcgagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggaaaccccggtaaacctggagacgctccggaaagcggaccatccagccccg
gttcgaaggcagacctgttcaagcaccaacagaggtatctcagtaacaaagaagacacat
acttctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tacggcgtgataacatgtgaaggctgtaagggctttttcaggaggagtcagcagagcaat
gcagcttactcctgtccccgtcagaagaactgcttgatcgaccgcacaagccgcaaccgc
tgccagcactgccggctgcagaagtgcctggcagtgggcatgtcacgagatgcagtgaag
tttggtcggatgtcaaagaagcagcgagacagcctatacgctgaggtccagaagcaccgg
ctgcagcagcagcaacgtgaccaccaacaacagcctggggaggcggagccactcacacct
agctacggcctctctgccaatggcctcacggagcttcacgatgacctcagcggctacatg
gatggtcatactcctgatggcagcaaaccagactcggctgtcagcagcttctacctggac
attcagccatctcctgaccagtcaggcctggacatcaacggcatcaagccggagcccatc
tgcgactttgccccaggctctggcttcttcccctactgctccttcaccaacggggaaacc
tcccccaccgtgtccatggctgaactagaacacctggcccagaacatttctaagtcacac
atggagacatgtcagtatctgagagaggagctgcagcagatgacctggcaggctttcctg
caagaggaggtggagagctaccagaacaagccccgggaagtcatgtggcagctgtgcgct
atcaaaataacagaggccattcagtatgtggtggagtttgccaagcgcatcgacggcttc
atggagctgtgtcagaacgatcagatagtgctgctgaaagcaggctctttggaagttgtg
tttgtcagaatgtgccgtgcctttgactcgcaaaacaacacagtctattttgatggaaaa
tatgctggacctgatgtgttcaagtcattaggctgtgacgacttgatcagctccgtcttc
gagtttgggaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttctcc
gcctttgtgttgatgtctgctgaccggtcctggctgcaggagaaggtgaaggtggaaaaa
ctccagcagaagatccaactggccctccagcacgtcctgcagaagaaccacagagaggac
ggtatacttacaaagttgatatgcaaagtgtcgacactgcgggcgctgtgcagtaggcat
acagagaagcttacagctttcaaagcaatatacccagacattgtgcgtgcccacttcccc
ccgttatacaaggagctgtttggatcagactttgagcagtccatgcccgttgacgggtag
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