Oreochromis niloticus (Nile tilapia): 100690062
Help
Entry
100690062 CDS
T06104
Name
(RefSeq) CLIP-associating protein 1 isoform X26
KO
K16578
CLIP-associating protein 1/2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
100690062
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
onl04812
]
100690062
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
100690062
Cytoskeleton proteins [BR:
onl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
100690062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
Sec7-like_HUS
HEAT_DAAF5
ParcG
MMS19_C
Paxt-1_C
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
100690062
NCBI-ProteinID:
XP_013132669
Ensembl:
ENSONIG00000003624
LinkDB
All DBs
Position
LG23:complement(24067428..24119616)
Genome browser
AA seq
1570 aa
AA seq
DB search
MEEEVEAVSMEYLLEQVTQKDLGKRLQVGQEVMELILDEERSPELEQDQSMLDRMVDCVA
SSWVNSSNFKVVLLGMDILSALVSRLQERFRTQVGTVLPSLIDRLGDAKDQVREQDQALL
LKIMDQAANPQYVWERMMGGFKHKNNRTREGLCLCLISTLNVFGSQSLTLSKIVPHICSL
LGDPTSQVRDGAMNCLVEIYRHVGERVRIDLGKKGLPQSRLNVIFSKFDEVQRSGNMVLS
PLSDKNFEDDDSVDGGRSSSSSKGTSLSGRKAVSMGSFRRPASASSSKSAGRDGSSAGAV
DEEDFIQAFEDVPTVQIYSNREVEEAMTKIRDVLSDDKRDWELRVAALKKVRSLLLAGAP
EFDGFLQQLRLMEAAFKLSAKDLRSQVVREACITLGHLSSVLGNRFDHAAEAIMPILLNL
VPNSAKVMATSGMAAIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQT
SCLERHGTVLMETIKKGIHDADAEARSVARKCYWSFHSHFSREAEQLFQGLESSYQKALQ
AHLRSGDSLMSLPASDRSSSSSQESLNRPLSAKSTVGSSSARSKPTHTSRTPAAASSPSS
LQRSRSDVDVNAAASASARTRMPAVPSTVLSSASPFSSASALPPGSYASLGRVRTRRTSS
GNGPSVTDTRGRSRGKVVSQSQPGSRSGSPGRLLSSTYGRIPRPTMGTGATTAATGSTST
SLTDKSRPRGHRSQGCSRETSPTRSGTARSRIPRPSMSQGCSRETSRESSRDTSPARGFS
PLDRLSHQARISASVNAMRILNTGTEVEAAVADALRRPVRRRFESPGMYSDDDANSDASS
ACSERSYSSRNGGVAPHYLRQTEDVAEVLNHCASANWSERKEGLLGLQNLLKSQRMLSRV
ELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIVLHRDDLLDWLFVLLTQLLKKMGADLL
GSVQAKVQKALDVTRESFPYEQQFNILMRFIVDQTQTPNLKVKVAILRYIEALARQMDPA
DFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLIALFELNTPEFTMLLGALPKTFQDG
TTKLLHNHLRNASANSGISMASPSNSAGRTPPRQPSSRSSPLTSPTNCSHGGLSPSRLWG
WSADGLSKFPPPPFPSPLPPPTAHSSLKALRRAYSPSMLEYDSENLNSEEIYSSLRGVTE
AIQNFSFRSQEDLVEPLRRDGKKDGVMTGGGASSDSEPRPSGDAVEGGRTALDNKTSLLN
TPSPRSFAGPRFREYNPYNYTDGISTMDKATLKEALYEDAVEQLREGRRQESVENKILNP
KSFPAGAAEQLELVGELLKELSQGQAGERGPEERRGTLLEMLKVAREDSLVVWEEHFKTM
LLLLLETLGDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKMLEAHKDSHKEVVRAA
EEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTRAIERITREPLHQLLPDIIP
GLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPYLAQLTGSKMKLLNLYIKRAQTSTSN
SSSSSDISSY
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggtggaggcggtgagcatggagtacctgctggagcaggtgacgcagaag
gacctggggaagaggctccaggtgggccaggaggtcatggagctgatcctggatgaggag
aggtccccggagctggagcaggaccagagcatgctggacaggatggtggattgcgtggcc
agctcctgggtcaattccagcaacttcaaggtggttttactggggatggatatcctgtcg
gctctggtgagccggctgcaggagagattcaggacacaggttggaactgtcctgcccagt
cttatcgatcgactgggagacgccaaggatcaagtcagagagcaggaccaagcacttctg
ctgaagatcatggaccaggctgcaaacccacagtatgtgtgggagcgaatgatgggagga
ttcaagcacaagaacaacaggaccagagagggactctgcctgtgtctcatctcaacttta
aacgtgtttggctctcagagtctgacgctcagtaaaatcgttcctcacatctgcagcctc
ctcggagaccccaccagccaggtgcgtgatggcgccatgaactgcctggtggagatctac
cggcacgtcggcgagcgagtgcggatcgacctgggaaagaagggcctgcctcagtcacgg
ctgaacgtcatcttcagtaagttcgatgaagtccagaggtcggggaacatggtcctgtca
cctttgtcggacaagaacttcgaggacgatgactcggtggacggcggccgctcctcgtcc
tcgtccaaaggaacctcgctgtccgggaggaaggcggtgagcatgggttcatttcgacgc
cctgcctccgcctccagcagcaagtctgcagggagggacgggtccagtgctggagccgtg
gatgaggaggacttcatccaggcgtttgaagatgttcccacagtgcagatctactctaac
agggaggtggaggaagccatgacgaagattcgagacgtgctgtcggacgacaagcgggac
tgggagctgagagtggcagctctgaagaaagtgcgttcgctgctcctggccggtgcacca
gagttcgacggcttcctgcagcagctgcgtctcatggaggcggcgttcaagctgtctgcc
aaggacctgcgatctcaggtggtgagggaggcctgcatcactctgggacacctgtcgtca
gtgctcggcaaccggttcgatcacgcagcagaggccatcatgccaatactcctcaacctg
gtccctaacagtgccaaagtcatggccacgtccggcatggccgccatccgcctcatcctc
cgacacacacactacccacgcctcatccccatcatcaccagcaactgtacctccaaatct
gtggctgtgcgaaggcgctgcttcgagttcttggacctgctgctgcaggaatggcagacg
agctgtctggaaaggcacggcacagttttaatggagactataaagaaagggatccatgat
gcagacgctgaggctcgctctgtggccagaaagtgttactggagcttccacagtcacttc
agccgggaggcggagcagctgttccagggcctggagtcgtcctatcagaaagctctgcag
gctcacctgaggagcggagacagtctgatgtcgctccccgcctctgaccgctcctcctcc
tcttctcaggagagcctcaatcgacctctgtctgcaaaaagcactgttgggagcagctca
gcccgatccaaacccacccacacctccaggacgccggctgccgcctcctcccccagctca
ctccagcgctcccgcagcgacgtggacgtgaacgccgcggccagcgccagcgcccgcacg
aggatgcctgccgtaccctccactgtgctgtcgtcggcctcgcccttcagctctgcctcg
gcgctgcctcctggatcctacgcttcactgggtcgagtgcgaacgaggaggacaagctca
ggaaacggtccgtcggtgacagacacccggggccggagtcgagggaaagtcgtctctcag
tcccagcctgggagtcggtcaggctctcccgggcggctgctgagctccacctatggccgg
atccccaggcccaccatgggcaccggtgccaccaccgccgccacgggtagcacctccacc
agcctgaccgacaagagcagacctcgaggtcaccgcagccagggctgcagccgagagaca
agccccaccagatcaggcacggcccggagtcgcatccctcgaccaagcatgagtcagggc
tgcagccgcgaaaccagtcgcgagagcagccgcgacaccagcccggcgcggggcttctcc
cccctggaccggctgtcccatcaggctcggatctctgcctcagtcaatgccatgaggatc
ctcaacacgggcaccgaggtcgaggctgcggtcgccgatgctctgcggaggccagtgagg
cggcggttcgagtcgccggggatgtactcagacgacgacgccaacagcgacgcctccagc
gcctgctctgagcgctcctacagctcacgtaacggcggcgtggcgccgcactacctgcgc
cagacggaggacgtggcggaggtgctgaaccactgtgccagcgccaactggtccgagagg
aaggagggactgctgggactgcagaacctgctcaagagccagaggatgctcagtcgtgtg
gagctgaagaggctttgtgagatcttcaccaggatgtttgcggaccctcacagcaagaga
gtcttcagcatgttcctggagactctggtggacttcatcgtgctgcacagggacgacctg
ttggactggctcttcgtcctgctcacacagctgctgaagaagatgggcgccgacctgctg
ggctccgtccaggccaaagtccagaaggctctggatgtcacgagggagtccttcccatac
gagcagcagttcaacatcctgatgcgcttcatcgtggatcagacgcagacgcccaacctg
aaggtgaaggtggccatcctgcgctacatcgaggctctggccaggcagatggacccggcc
gactttgtcaactccagcgagacacgcctcgccgtttcccgcatcatcacctggaccacc
gagcccaagagctccgatgtccgcaaggcggcccaggtggtgttgatcgccctctttgag
ctgaacactccggagttcaccatgctgctgggtgcgctgcccaaaaccttccaggacggg
acaacaaagctgctgcacaaccacctgaggaacgccagtgccaacagtggcatcagcatg
gcgtctcccagtaactcggcaggtcggacgcctccgcgacagcccagcagccgcagcagc
ccgctgacctcccccaccaactgctcccacggcggcctttcccccagtcggctgtggggt
tggagcgcagacggcctctccaagttccctcctccacccttcccctcccctcttcctcca
cccactgcccactcctccctcaaggccctgcggcgagcttactcacccagcatgctggag
tacgacagcgagaacctgaactccgaggagatctacagctcgctgcgcggtgtcaccgag
gccatccagaacttcagcttccgcagccaggaggacctggtggaaccgctgaggcgggac
ggcaagaaggatggcgttatgactggaggcggggcgtcctcggactccgaacctcgtccc
agcggtgatgcggtggagggtgggcgcactgccctggacaacaagacctctctgctgaac
acgccgtctcctcgatccttcgccgggccgcgcttcagagagtacaacccatacaactac
acagacggcatcagtacgatggataaagctacgctgaaggaggcgctgtatgaggacgct
gtggagcagctgcgagaaggccgccggcaggaaagtgtggaaaacaagatcctgaacccc
aaaagtttcccagccggggctgctgagcagctggagctggtcggagagctgctgaaggaa
ctctcccagggccaggcaggggagcggggccctgaggagcgccgggggaccctgctggag
atgctgaaggtggcccgggaggacagcttggtggtgtgggaggagcactttaagaccatg
ctgctgctcctgctcgaaacgctgggagacaaagaccacacgatccgggcactcgccctg
cgagtcctaaaggagattctgaggaaccagcccgcccgcttcaagaactacgccgagctc
accatcatgaagatgctggaggcccacaaagactcgcacaaggaggtggtgcgggcggcc
gaggaggcggcctccacgctggcgggctccatccaccccgagcagtgcatcaaggtgctc
tgccccatcgtgcagacagccgactaccccatcaacctggccgccatcaagatgcagacg
agggccatcgaacgcatcaccagagagccgctgcaccagctgctgcccgacatcataccc
ggactcctgcagggctacgacaacactgagagcagcgtgaggaaggccagcgtcttctgc
ctggtggccatctactctgtgattggagaggagctgaagccttacctggctcagctgacc
ggcagcaagatgaagctgctgaacctgtacatcaagcgggcgcagacctccaccagcaac
agcagcagctcctccgacatctcctcctactaa
DBGET
integrated database retrieval system
