Oreochromis niloticus (Nile tilapia): 100690271
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Entry
100690271 CDS
T06104
Symbol
lrrc4b
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04514
Cell adhesion molecule (CAM) interaction
onl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100690271 (lrrc4b)
04517 IgSF CAM signaling
100690271 (lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100690271 (lrrc4b)
Cell adhesion molecules [BR:
onl04515
]
Immunoglobulin superfamily
NGL family
100690271 (lrrc4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
100690271
NCBI-ProteinID:
XP_019213943
LinkDB
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Position
LG4:29606318..29657923
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AA seq
731 aa
AA seq
DB search
MRIATLTCLPGPSPXLFLLAQLLLRLLLPGPELVGAASTCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADVSVNYTYFTTVTVETVDTVGGNDYALVAINETFIRVPPGP
TPSDLWPDGVATTDSSLPISWSSSSPRATRPTFTEPITDPTLMDDVMKTTKIIIGCFVAI
TFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGATVTQSG
SSGIGGTQSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNNNMMGLGMGTGSGVGLNNNNN
PSPCSQSQNISCSQIPTSTGGGTPTGGTLPSPVPLPQLGLHSSLKGLMGKGQNEPLLFKS
GSKENVQETQI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccctcccctntcctctttctattggcc
cagctgctgctgcggctcctcctccctgggccggagttagtgggagccgcctccacctgc
ccctccctgtgcacctgctccaaccaggccagccgagtcatctgcaccaggcaaaacctg
gaggaggtgccagaaagcatatcagtcaacacgcgatacctcaacctgcaggagaactca
atacaggttatcaagtcggacacattcaagcacttgaggcaccttgaaatcctccagctg
tccaagaatcagatacgtcagattgaagttggagcattcaatggcctgcccaacctcaac
acgctggagctctttgacaaccgcctcacgctggtgccatcacatgcctttgagtacctc
agcaagctgcgggagctgtggctgcgcaacaaccccatcgagactctgccaggctatgcc
ttccaccgtgtgccctcgctacgtcgcctggacctgggtgagctcaagaagttggatttc
atctctgatgcagcgtttgttggcctcatcaatctgcggtacctaaacctgggcatgtgt
gggctgaaagacattcccaaactaacagcccttgtacgcttggaagagctggagctgtca
ggaaataggctggagatcatccgtcccggctccttccaaggcttggtttctcttcgcaag
ctgtggctaatgcactcacaggtttccgtcattgagcgcaatgcctttgatgacctgaaa
aacctggaagagctcaacttatcccataattccctccactccttgccccacgatctcttc
acaccccttcaccagctagagagggtacaccttaaccacaacccctgggtgtgcaactgc
gatgtgctttggcttagttggtggttgaaagagacggtgccgagcaacaccacctgctgc
gctcgttgccatgctccaccattcttaaaaggcaaatacattggagagcttgaccagagc
cacttcacatgctatgcgcccgtcattgtggagccacctacagacctcaatgtcaccgag
ggtatggctgccgagctgaagtgtcgaacgagcacatccacaacatccgtcaactggatc
acccctaatggcactctcatgacccacggctcctaccgcgtgcggatatcagtcctgcac
gatggcacgctcaacttcaccaatgtaaccctgcgagacacaggccagtacacctgcatg
gtgactaacgctgctggcaataccactgcaaccgctgtcctcaacgttactgctgctgat
gttagtgtcaactacacctattttacaacagttactgtggaaactgtggatactgttgga
ggtaatgattatgcgttggttgccatcaatgagaccttcatccgtgttccacctggcccc
actccctctgatttgtggccagacggtgttgctaccacagactcctctctgcctatcagc
tggtcctcctcctctccccgcgccactcgacccaccttcactgagcctatcacggaccct
accttaatggatgatgtgatgaagaccaccaagatcatcattggctgcttcgtagccatt
accttcatggcagccgtgatgctggtggtgttctacaagcttaggaagcagcaccagctg
cacaaacatcacggccctgcacgtgccatcgagatcatcaatgtggaggatgagctcggc
gctggggccagtggccggggcagcggcatctcagggggagccactgttacacagagtgga
agcagtggaattggaggtacccagagcctcaggctgcaccacccagagatagtcaacctg
cccaacctggctcgatcggagcacctcaaccactactacaaaactcatcacttcaacaac
aacatgatgggcctgggcatgggcacaggatctggtgtgggcctcaacaacaataacaac
ccctcaccatgctctcagtcacagaacatatcctgttcccagattccaacctccactggt
gggggaacaccgacaggtggcactctgccctccccagtgccccttcctcaactgggtctc
cacagttctctgaaaggcctgatggggaaaggccagaacgagccactactttttaagagt
ggctccaaggaaaatgtgcaagagactcaaatctga
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