Oreochromis niloticus (Nile tilapia): 100690311
Help
Entry
100690311 CDS
T06104
Name
(RefSeq) DENN domain-containing protein 3
KO
K20162
DENN domain-containing protein 3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
100690311
Membrane trafficking [BR:
onl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100690311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40
uDENN
WD40_WDHD1_1st
Beta-prop_EML_2
dDENN
Beta-prop_WDR75_1st
Beta-prop_LRRK2
WD40_2
Beta-prop_WDR90_POC16_2nd
CFAP300
bPH_3
Motif
Other DBs
NCBI-GeneID:
100690311
NCBI-ProteinID:
XP_005472815
Ensembl:
ENSONIG00000005993
LinkDB
All DBs
Position
LG11:complement(19429085..19451693)
Genome browser
AA seq
1282 aa
AA seq
DB search
MADSLPPALLEACVVVGASSDKLKEICQTINNDGTVEHLLLEPEVLSVLAPPFVSRTQAE
SEMLRSHGKLRRSFIRKKRELPPSVAPTPNQGGDEAGGRIEDISVPKNIDLMALPQLCFP
GGLQVTSEQKEEQFHFLVFTDILGNKTHGVVMQCYRPILEGMSLYQNGRGLSKCPKLFCA
YSICVISKHPYFTALKDCLSCLLIQLRTCRLSDMEERVKEFAAKLTLVPIPPPGQLHLMF
TIRPLTIILPSREDKDHPVIDLDLHLPFLCFRPQQLLQVLSCLLQEQRVVLFSADWARLT
LVAESLLLFLQPLLWQHPYVPVLAKGMLDFLMAPTAFLMGCHLSHFADISAETDDLILIN
IDNGSLSTSTFDTVDLPDIPPVAAHCFTQRCKLLRIHFDLDQCHHASCTDISEQRAQRRT
WQRSLNSDIQRIALELIVNIFRDVSSHLNYEHRVFHSEEFLKTREPAEQLFYKKVLETHI
FHSFLKDRLNRKMDSFARMELSTRSEMQKMKAMVEAPHRPTMQQIQARRKGSITEKRLSK
RLGMSLPNLREDQIIGFQRNTPLSKISISDPTPSTTPKPIKVFKLPDFPASLSFHSVQSY
YIELIQQLGKAIFYVQSENSAMLARYYYLRGLINTLCSRRLDALSDFQNLNKTDTAIFPT
RLVTWLVDSLQRDERQQAERRPELKRLILKVKTDNEKPLVEPDDHVKKFQLPCKPLHQEE
FMRCVQECRIVRDVATIQRLFDALTDIAYAHPSLRGQPKQVDPELFRVFYTFWKDMEAEA
QDVNLPSDVIDRLDNSECVYKLSSCVKTSHGVGKIAMTQKRLFLLTEGRPGFLEITKFRD
IQEVKITSVPFLLVRIPSLRIQTSSRPEAFEANLKTETELWNLVIKEMWAGRKMADQHKD
PQYMTQALTNVLLIDAVTGCLQNQRSITAASKLAYFDKIRQEVPMIVPKTTSETLKHKIN
PSLDLAEPQTVHVLLYSPGQLTGTGKVGDMNPKLWVALSGGKVVVFDAASWSMLQDCIQV
GQSQLNCMIGLVQEQVWIGSQDSVIYIIDTHSMSCNKQLTEHRHDVTGLAVDASNQPNSL
LTYSCSRDGMILQWDSSSLKVKRQFLLSCDYLSSIQIHNSALWCCCGDGIVELKKSGTPQ
RKITLHKDLQSMPSSFSSFIYIPERGQLWTGCADSVELCLWHTNNHRHPFKIISLPGSSG
VTCMIRVKDQIWVGCRGRSDAEGQCNGQLSSQVLVVDIESHTVAKELQAHSDSIQTLCSA
EDRYVLSGSACRDGKIAIWKVE
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggcagactctttgccacctgctctgctggaagcctgtgtggtggttggagcatccagt
gacaaactcaaggaaatctgccagaccattaacaatgatggaactgtcgaacacctcctg
ttggagccggaggttctttcagtcttggcgccaccttttgttagcagaacacaggctgag
agtgaaatgttgagatcacatgggaagctgcggcgctcttttatcaggaaaaagagggaa
ctgcctccttcagttgcaccaacacccaatcaaggtggagatgaagcaggtggaagaata
gaagatataagtgtacctaaaaacatcgatctcatggctttacctcagctctgcttcccc
ggtggcctccaagtaaccagtgaacagaaagaggaacaattccacttcctggttttcaca
gacatccttggtaacaagacccacggagtagtaatgcagtgctaccgtccaatactggaa
gggatgtctctctatcaaaatggtagagggttatcaaagtgtcctaaactcttctgtgcc
tacagcatctgtgtcatatccaagcatccttacttcactgcactcaaagactgtctttca
tgtcttttaatccagctgagaacctgtcgactgtcagacatggaagagagagtgaaggag
tttgcggccaaactgacacttgtgccaattccacctcctggacagctgcacttgatgttt
acaatacgtcctctgaccatcatactgccctccagagaggacaaggaccacccagttata
gatttagacctccacctgcccttcctttgcttcaggccacagcagctgctgcaggtcctg
tcttgtctcttgcaggagcagcgggtggtgttattttctgctgactgggctagactcacg
ctggtggcagagagcttgttgttgtttctgcagcctctgttgtggcagcacccatatgtt
cctgtcctggctaaaggcatgctggactttctaatggctcctacagcctttcttatgggc
tgccatctcagtcattttgcagacatatcagctgaaacagatgatctgatcttaattaac
attgataatggaagtctcagcacttctacttttgatactgttgacctaccagacattcct
ccagttgctgcacactgcttcacacagaggtgtaagttattgcgaatacattttgacttg
gatcagtgccaccatgcaagttgcactgacatcagtgaacagcgggcacagaggcgaacg
tggcaacgcagtcttaacagcgacatccagaggattgcactagaattaattgtcaacatt
ttcagggatgtgagcagtcatctgaattatgaacatcgagtgtttcacagtgaagagttc
ctgaaaaccagagagccagctgagcaacttttttacaagaaggtgctggaaacgcatatc
ttccattcatttctcaaggatcgtctcaacaggaaaatggatagctttgcacgaatggag
ctaagcactcgttctgagatgcaaaaaatgaaggccatggttgaagccccacacagaccc
accatgcagcagattcaagccaggagaaagggctccatcacagagaagaggctgagtaag
agactgggcatgagtctccctaacttgagagaagatcagattatcggcttccaaagaaac
acaccgctctccaagatctccatatctgaccccacaccaagcacaactccaaaacctata
aaggtgttcaaacttccagacttcccagcgtctctgtccttccactctgtccaaagttat
tacattgagctcatccagcagctcggaaaagccattttctatgtgcaaagtgagaactct
gccatgctggccagatactactacttgcgtggtttaatcaacacactgtgctcgcggcga
ctggatgcactgagcgacttccaaaacctcaataagaccgacactgcaattttccccact
cgcttggtcacatggcttgtagactcgctgcaaagagatgagagacaacaagctgaaagg
cggcctgaactcaagagactcatcctcaaggttaagacagacaatgagaagccgctggtg
gagcctgatgaccatgtaaagaagtttcagcttccctgtaagcctctgcatcaggaggag
tttatgcgatgcgttcaagagtgtaggattgttagagatgtggcgaccatacagcgttta
tttgatgctctcactgacattgcatatgcacacccctctctccgaggtcagccaaagcag
gtggaccctgaacttttcagagtcttctacacattctggaaagacatggaagctgaagca
caagatgtcaacctgccctctgatgtcattgaccgacttgacaatagtgagtgtgtctac
aagttgtcctcctgtgtcaagacttcccacggtgttggcaaaatcgccatgacgcagaaa
cgcctgtttttgctcactgaaggacggcccggtttcttggaaatcacaaagttcagagat
atacaggaggtaaaaattacctcagttccctttctgctcgttcgtattccatcccttcgt
atccagacgtccagcaggcctgaagcgtttgaggccaacctaaagacagagactgagctc
tggaatcttgtgatcaaagaaatgtgggctggacgcaagatggcagatcaacacaaggac
cctcagtacatgactcaggctctgaccaacgttctgctaatagatgctgtcacaggctgc
ctgcagaatcagagatccatcactgctgcttcaaagctggcttactttgataaaatcaga
caagaagtgcctatgatagtgcctaaaactacctcagagactctcaaacacaagatcaac
ccatcattggacctggctgagccacagaccgtacatgtgctgctttatagcccaggtcag
ctgactggtactggcaaagtgggtgatatgaacccaaagctgtgggtggctctcagtggg
ggtaaggtggttgtattcgatgcagcgagttggtcaatgctgcaggactgcatccaggtc
ggacagtcgcagctgaactgtatgataggactggtccaggagcaggtgtggattggttct
caggactctgtaatctacatcatcgacactcacagcatgtcctgcaacaaacagctgacc
gaacacagacatgacgtgactggcctcgcagtggacgccagcaaccaacccaacagcctg
ctgacatactcctgcagccgcgatgggatgatcctgcaatgggactcatccagtcttaaa
gtgaagcggcagtttttactcagctgtgattatctctcctccatacagatccacaacagt
gctctgtggtgctgttgtggtgacggcattgtggaattgaaaaagagtgggacaccacaa
agaaagataacacttcataaggacctacagagcatgcccagtagtttcagcagcttcatt
tatataccagagcggggacagctgtggacaggctgtgcagactcagtagagttgtgtctc
tggcacacaaacaatcacaggcatccatttaaaataatctccctgcctggaagttcaggg
gtcacctgtatgattcgtgtcaaagaccagatctgggttggctgtcgtggaaggagtgat
gctgagggtcagtgtaatggtcagctgagtagccaagtgttggtagtggacatagagagc
cacacggtagcaaaggagctgcaggcccattcagacagcattcagactctctgctctgcc
gaggatcgatacgtcctcagtggctctgcgtgtcgtgacggcaagatcgccatctggaag
gtcgaatag
DBGET
integrated database retrieval system