Oreochromis niloticus (Nile tilapia): 100690356
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Entry
100690356 CDS
T06104
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
onl03029
]
100690356 (polrmt)
Enzymes [BR:
onl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100690356 (polrmt)
Mitochondrial biogenesis [BR:
onl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
100690356 (polrmt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
Motif
Other DBs
NCBI-GeneID:
100690356
NCBI-ProteinID:
XP_005479056
Ensembl:
ENSONIG00000002405
UniProt:
A0A669CPG0
LinkDB
All DBs
Position
LG23:complement(40861962..40907760)
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AA seq
1330 aa
AA seq
DB search
MSLLRVCAFAKLLSRRSLIEKCAVRVSFADCCQPCASVRGGAVRWISGTSLQLQNINVSS
RIPKTDEAKKRALEQFQLLDVLEARIQQLQCDVVLDVQHAKVQFMKAPSHGRGTSSGKGH
RSTPQEKTDMPKSGQTGDKGSFKSQPRRWIEKLTQEKKNKLKKQQRLQQKMQICVKEKLP
TTSSKGTKSSLMSTGTTHKTISTGVKKSRGHSKLSDEIRAAVSSTATTATATAMAGAATV
PQKASKKKRKDSKIQKEGTELTGTDPQGTAEELAEVEELEKRLNQQVSHWTLSSKPERMQ
EGSVGNACQDISLSICSYLEACIFAGDIERAHHFLLSQHRVMSRRKHLNTGVYNIMMRVW
AKKGTLNQIGRMFILLEEAGLKPNLGSYFAALECMGRNPNCSPKVVSRCLSQMEEDGLSV
DDLFNQCVFRQDERDMLLKAIRIVKPEYQPSLNMHTSQFSSLLVQDFYTERADHTYPKLD
FTQEDLQERFKRQLSVEQACTITIDSVEAAKPVTENMAKMRELLAEQRIQWQKILLQALR
ESKMILAKSNTRDYRLNLYPYLCLLEDKEYVDIMIQSVANLPPSGESLKILARDLGNRVF
TKYCVRQKHQNQTVEKLGSIYNAYTDLLAKDTKEYDVLPREQWWKLEMEQSSGPTLQGGE
TSWPYIVTLELGTYMVDMMVKNLKINSDILNPAYDRKLIPILYHMYTFRSTRQIGFIKPH
PILTQMQQEAMETKLTFDSYVMPMLCPPVPWTSVKFGAYLLTPTKLMRTVDGATQHEELL
EKCQNLHAIYDSLNQLGNCAWKINKPLLDIIISIFNDRGSDKLDIPPPLSEAPKIPHFNP
QDPTYTASEKAHMKRQVINAKKKCSEMHSLRMDALYKLSIANHMRDEIFWFPHNMDFRGR
TYPCPPYFNHLGSDVTRAILMFAEGKLLGPKGLDWLKIHLVNLTGLKKRSSLQGRLEYAN
TIMEDILDSADNPLNGRKWWMNADEPWQALACCMEIANAVRSPDPTQFISYFPVHQDGSC
NGLQHYAALGRDVIGATSVNLMPCDVPQDVYSGVAQQVEELRARDAESGLKIAQVLEGFI
SRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIDEFPKEFVWDASHYLVRQVFNALKEMFT
GTREIQDWLTESARLISKSGHTVEWVTPLGLPIIQPYHRTRNQVLKSTMQHINLKISHDT
KERPDTVKQKNAFPPNFIHSLDSTHMMLTSLYCYSSGLTFVSVHDCFWTHALTVDTMNKV
CREQFVALHSQPILQELSNFLLQKYCTGVPTEAKSKKYQEYRRLLMLLAKVPQTGDFDLQ
RVKESTYFFS
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcttagagtttgtgcctttgccaaacttctgagtcgtcggagcttaattgaa
aaatgcgctgtccgcgtgtcttttgcggactgctgtcagccgtgtgcgtcggtgagaggt
ggcgcagttagatggatatcaggaacatctttgcagcttcaaaacataaatgtttcatct
agaattccaaagaccgatgaagcaaagaaacgcgcactggaacaatttcagctgttagac
gtacttgaggccagaatccaacaactacaatgtgacgtcgttctagatgtccaacatgca
aaggtgcagtttatgaaagcgccttctcatggaagaggtacttcatctggtaagggccac
agaagcacaccccaggagaaaactgacatgcctaaatctggacagactggcgataaaggc
tcctttaaatctcagccccgccgctggatagaaaaactaactcaagagaagaagaacaaa
cttaaaaaacagcagcgcctccagcaaaaaatgcagatatgtgtcaaagagaaactacca
acaacatcatctaaaggtaccaaaagcagcttgatgtccacaggtacaacacataaaaca
atatctactggagttaaaaagagcagaggtcattcaaaactgtcagatgaaatacgagct
gcagtttcttcgacagctaccacagctactgccactgccatggcaggagcagccaccgtg
ccacaaaaagcatctaaaaagaaacgaaaagactctaaaatacaaaaagagggaactgaa
ctgactggtactgaccctcagggcacagccgaggagctggctgaggtggaggagctggag
aagagacttaatcaacaagtaagccattggacattgtcaagtaaaccagagcgcatgcag
gagggcagtgtgggaaatgcatgccaggacatcagtcttagcatctgctcatacttggag
gcctgtatatttgccggggacatcgagcgggcacatcatttcctgctcagtcagcacaga
gttatgagtcgacgaaaacatctcaacacaggcgtttacaacatcatgatgagggtgtgg
gccaaaaagggtacattgaatcagattggccgcatgtttattcttttagaagaggctggt
ctgaagccaaatcttggttcctactttgctgctttggagtgtatgggtcgcaacccaaac
tgctccccaaaggttgtttcaaggtgtctaagccagatggaggaggatggcctctctgtg
gatgatctgttcaaccaatgtgttttccggcaagatgagagggacatgctgctaaaagcc
atacgcatcgtaaagccagagtatcagcccagcctcaacatgcacacaagccagttttct
tcattgctggttcaagacttctacacagagagggcggaccacacctacccaaaattggac
ttcacgcaggaggatctccaggagcgttttaaacgtcagctgagtgtggaacaggcctgc
accatcaccatagactctgtggaagctgccaagcccgtcaccgaaaacatggcgaaaatg
agggagctgttggcagagcagcggatacagtggcagaagatcctcctccaggccttaagg
gagagcaaaatgatcctggcaaaaagcaacaccagggactacagacttaacctttatcca
tatctgtgtctcctggaagataaagaatatgttgacatcatgatacagagtgttgccaac
ttgcctcctagcggagagtcgctgaagattttagctcgagatctcggcaatagggtcttc
accaagtactgcgtgcgtcagaagcaccagaatcagacggtggaaaagttgggcagcatt
tataatgcctacacagacctactggccaaagatactaaggagtatgacgtccttccaagg
gagcagtggtggaagctggagatggagcagagttcaggacctacgctgcaggggggcgag
acaagctggccatacatagtaactctggagcttggcacgtacatggtggatatgatggtt
aaaaatcttaaaattaatagcgacatcctgaacccagcctatgacaggaaactcatcccc
atcctctaccacatgtacacctttcgcagcacccggcagattggcttcatcaagccccac
cccatccttactcagatgcagcaggaagccatggagaccaagttgacttttgactcctat
gtgatgccgatgctgtgccctccagtgccctggacatcagtcaagtttggagcatacctg
ctcacgccgacaaagctgatgcgcacagtggacggggcgacccaacacgaagagttgttg
gagaaatgtcaaaatcttcatgccatctatgactctctcaaccagttgggcaactgtgcc
tggaagatcaacaaacctttgctggacattattatctccatctttaatgatcgtggaagc
gataagctagacatcccacctcctttgtcggaagctcccaaaatccctcacttcaaccca
caagatcccacttatacagctagtgagaaggcccacatgaaaagacaggtgatcaatgcc
aaaaagaaatgcagcgagatgcacagcttacgtatggatgctctctataaactgtccatc
gccaaccacatgcgagacgagatcttctggttccctcacaacatggacttcaggggacgt
acctatccatgtcctccatactttaatcacctgggaagtgatgtcacacgggcaatcctt
atgtttgcggaggggaagctgcttggtcccaagggcctggactggttaaagatccacttg
gttaatcttacaggattaaagaagaggagctcactacagggccgacttgagtatgccaac
actatcatggaggacatactggactctgccgacaaccctctaaatggtagaaagtggtgg
atgaatgcagatgagccatggcaggctctggcctgctgcatggagatagccaatgctgtg
agatctcctgatccaacacagttcatctcttattttcctgttcatcaggacggctcctgt
aatggtctccagcactacgccgctctaggcagagatgttattggtgctacatcagtcaat
ctcatgccctgtgatgtgccccaggatgtctacagcggagttgcacaacaggtggaggag
ttacgagctcgggatgcagagagtggactgaagatcgcccaggtgctggagggcttcatc
agcaggaaggtggttaaacagacagtgatgactgtggtgtacggagtcactcgctatggc
ggacgcctccagattgagaaaagactgaaggagattgacgagtttcccaaggagtttgtg
tgggatgcatcccattacctggtgcgtcaggtgttcaatgccttaaaggagatgtttaca
gggaccagagagatacaggactggttgactgagagcgccaggctcatctctaagtcgggt
cacactgtggaatgggtgacacccctggggttacccatcattcaaccataccaccgcacg
cgcaaccaagtgctgaagagtaccatgcagcacataaacctcaagataagccacgacacc
aaagagagaccagacacagttaaacagaagaatgcttttccaccaaacttcattcactct
ctggactccacacacatgatgctgacatctctctactgctatagttctggtctgactttt
gtctcagttcatgactgtttctggacgcatgcgctcactgtggacaccatgaacaaggtt
tgtcgggaacagtttgtcgccctgcacagccagccaatccttcaagagctgtccaacttc
ctgcttcagaaatactgcacaggagtcccgactgaagccaagagcaaaaagtaccaggag
tatagaaggctgttgatgctgctggccaaagtgccccagacaggtgattttgatctccag
cgggtgaaagaatccacttatttcttcagctga
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