Oreochromis niloticus (Nile tilapia): 100690413
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Entry
100690413 CDS
T06104
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100690413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100690413
03036 Chromosome and associated proteins [BR:
onl03036
]
100690413
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
100690413
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100690413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
CoV_S2
Motif
Other DBs
NCBI-GeneID:
100690413
NCBI-ProteinID:
XP_005472035
Ensembl:
ENSONIG00000004427
LinkDB
All DBs
Position
LG10:10474512..10495413
Genome browser
AA seq
1901 aa
AA seq
DB search
MSAVTLSNSSSKLNVLVNKLHEYLANSTEDSSGTAKVEDADGLTNRCCSTLTEAGADGKY
SRRKPSVVMKHSGLDESGDSNASEDLVLGPVNANGHLDITRLPKGTVLVRPEAVDNGRDD
FRGPEFRSRKSSVMRKEFSRRRGGVEHIGIVSCTACGRQVNHFRRDSLYRHPVLKVLICK
SCYNYYSSDDISKDCDGMDEQCRWCAEGGNLICCDFCSNAFCKKCILRNLGRKELSGILE
SKWYCYVCSPEPLFDLVMACDSVLENMERLWQQQRKRSRVDPGKSEIFNMLPHSPQNISL
DKWDHTGMDGNVVFNYSMLQISKDITKKAKHLVDSTNTLNQTFVNFIHTVTQNKPTLGVR
TRYLNSFLEVVKGLRKSLAALEDSLKEEFSDLDVSSSWEKLLSDHFDGLVTEAEIEIDMP
DDRCLSDLQKLAAEHLDDNDSDSKGFADGSLQDCPGKEMVSGSHKARQRTQKIGLKSTES
GVDMTKKLVVQLTPVAMEQEPSSAPPKTEEGKKDKKSKEKHVSEDEETSGSKMSNDNSSA
SLYLEEEQGNRRSPRVKTTPLRRPSDVKTKTSLSVGDSDSDSDAEEAPNKVPAKKNEEQS
LSRTRDDSDSDEVPAALLERAAMTQSSDEPQSDEDGGKASPNKVAKKCLFWLNKNTPISP
EKIRQKRKILDRTPEADSSNRRVKAHRESGTDSSSDEQDSQKKMKHLNTLRSIGKPHLVK
RGEEGVARKRSRIQGEDAKTKSRQEAMDSSTSSSEDEHDDDSGSDGSDQKMKPITEDVAL
LGAAAFHQSSGDEEQFGPSWAAEDDDDPENRIAKKLLLAQIKSDYSSGDDISSDEETQEA
ESDSLSDKEIKRGNDDNGTDEDGEDVTEDSSDNNFDEPISRHHLLRHKLTLDEGTSNDKD
APKSKEGKRERKRGARKENQSSDSESEADSDELDEDAGMSEELSESGDEAGEDGLKKAKT
KVKDKLHDYEKKTQEAYILLSDSSSEKTDQEDAPEEASENKVTPKGRKKIRRIIEDENLR
AETQEALREEEERCKRLANRDQQMEDRREIIVIEDELSQVVCPVTTKLVLDQDEETKKPL
VQVHRNLVTILKPHQVDGVQFIWDSCCESVKKANSSPGSGCVLAHCMGLGKTLQVVTFLH
TVLLSTELKFRTALVVCPLNTILNWVSEFKKWQNNMGEDKVKVTELATMKHTLGRLRALQ
RWQRDGGVMIMGYDMYRILSLDCKINNDEWKEEFYRTLVDPGPDFVVCDEGHILRNDGSN
ISKAMNAIKTQRRVVLTGTPLQNNLVEYHCMVNFIKKNLLGSLGEFRNRFINPIENGQCA
DSTPKDVRIMKKRAHVLHSVLGGCIQRRDYSELRQFLPPKYEYVLAVRVSPLQYNLYRYY
LDHFTGVSSLHNSKKMRPGANLFKDFQVLGRIWTHPWCLQLSYLSKLKKKSKGKAADLPK
NAETPMTEAEGWCEGMKENEGQEGNNTHSSTVIIDDFKVVQTVEAVETAPIRLKPPSPDE
RWYKDLLSERDAKILEHSGKMVLLFEILRMAEELEDKVIVFSQSLISLDLIEDFLADSHR
ARDPSAFKAGSWVKNVDYYRFDGSTSATLRKKWADEFNNPENVRGRLFLISTKAGSLGIN
LVAANRVIIFDASWNPSYDIQSIYRVYRFGQLKQVFVYRFLAQGTMEEKIYDRQVTKQSL
SFRVVDQQQIERHFTFHELTELYTFEPDLLNDPNSKKSKRPASVLPLDTVLAQLLEDCKD
HIVTYHEHESLLDHKQDEELSEAERKAAWDEYEAESHPASVPETSHQDDLDLKTNEQLLE
LLNKSRTTVSLTFMALQKMRIHTVEEYMFLMRQQYPQLPEAEVKSKAEVWRQYDLKRQEH
LHAFYRDALGQQQTLTFRIQSILNSRRNDATQMTVKQPGQT
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagtgacgctgagcaactctagcagcaagctaaatgtattggtcaacaaactt
catgaatacttggctaattccactgaggacagcagtggcacagcaaaagttgaggatgct
gatggtttgacaaacaggtgctgttctactttgacagaggctggtgctgatggcaagtac
tcgaggcgaaagccctcagttgtcatgaagcactctggattggatgaatctggggactca
aatgcaagtgaggacttggttcttggaccagttaatgcaaatggtcaccttgatatcact
agattgcctaaaggcactgtgctggtcaggcctgaagcagtcgacaatggcagagatgat
ttcaggggcccggagtttcgcagccggaaatcaagcgtaatgcggaaagagttttcaaga
agacgtggaggagttgaacacattggaattgtgagttgcactgcgtgtggccgacaagtt
aaccacttccggagggattccttgtatcgccatccagttttgaaagtccttatatgcaag
tcttgctacaactattactcaagtgatgacatcagcaaggattgtgacgggatggatgag
cagtgcagatggtgtgctgaaggaggcaacttgatctgctgcgatttctgtagcaatgct
ttctgtaagaagtgcattttaagaaatctgggaaggaaggaactgtcgggcatcttggag
agcaaatggtactgctatgtgtgtagcccagaacctctttttgacctggtcatggcttgt
gacagtgtccttgagaacatggaacgtttgtggcaacagcagcgcaagaggagtcgagtc
gatccggggaagtctgagattttcaacatgttgccacactcacctcaaaacatttcgctg
gataaatgggatcacactggtatggatggaaatgtggtgttcaactacagcatgctgcag
atttccaaggacattaccaaaaaggccaaacatttagtggactcaacaaataccttaaac
caaacttttgtcaatttcattcatactgtgacacaaaacaaaccaacacttggtgttcgc
actaggtacctgaactcatttttggaagtagttaaaggcttgaggaaatccctagcagca
ctggaggatagccttaaggaagaattcagtgatttggatgtatcgagcagttgggaaaaa
ctgcttagcgaccactttgatggactcgtaacagaagcagaaatagagatagacatgcct
gatgacaggtgcttgagtgacttgcagaaattggcagctgaacatttagacgataacgac
tctgactccaagggctttgcagatgggagtctacaagactgtcctggcaaggagatggtt
tcaggttcacataaagccagacagagaacacaaaagattggcctgaaatctactgaaagc
ggcgttgacatgactaaaaaactagtagtacaacttacacctgtagctatggagcaggag
ccgtcatctgcgccccccaaaactgaggagggaaagaaagataagaagtcaaaggaaaaa
catgtatcagaagatgaagaaacaagtggtagcaagatgagcaatgacaactccagtgca
tctctgtatctagaagaagaacagggcaatagacgttctcctcgggtgaagacaacccct
ttgcgccgaccaagtgatgtgaaaaccaaaacctctctttcagtaggagacagtgacagc
gactctgacgctgaagaggcccccaacaaagtgcctgctaaaaaaaacgaagagcaaagt
ctgagcaggacaagagacgactcagattcagatgaagtccctgctgctctgcttgagcga
gcagcgatgacacaaagttccgatgaaccccagagtgatgaggatggtggtaaagcgtcg
ccaaataaagtggcgaaaaaatgtctcttctggcttaataagaacactccaatctcacca
gagaagattaggcagaagcgcaagatactggatcgcacccctgaggccgactcaagtaac
agaagagtcaaagctcaccgtgaaagtgggacggactcctctagcgacgagcaagactcg
caaaagaaaatgaaacacttaaatacgctgaggtcaatagggaagcctcatcttgtcaag
agaggagaggagggtgtggctagaaagcggagtaggatacaaggtgaggacgctaagact
aaatctcgtcaggaagcaatggattcatcgacctcatcaagtgaagacgaacatgacgat
gactctggaagcgatggaagtgatcagaagatgaagccaatcacagaagatgtggcctta
ttaggagcagctgcattccaccaatcgtcaggagatgaggagcagtttgggccctcatgg
gcagcagaagatgacgatgatccagaaaatagaatcgctaagaaattgctattggcccaa
attaaatccgactactcctcgggtgatgatatctcttcagatgaagaaacacaagaggct
gaatctgattcactgagtgacaaggagatcaaacgaggcaatgacgataatggaacagat
gaagatggggaagacgtaaccgaagattcatctgacaacaactttgatgagcccatctcc
aggcaccacctcctccgtcacaaacttaccttagatgagggaacatcaaatgacaaggat
gcaccgaagagcaaagagggaaaacgggagcgcaaaagaggagccaggaaagaaaatcag
agctcagacagtgaaagtgaggccgacagcgatgagctggatgaagatgctgggatgagc
gaggagctgagcgagtcgggtgatgaggctggtgaagatgggctcaaaaaagcaaaaaca
aaggtgaaggataagcttcatgattacgaaaagaaaacacaagaggcttacattttgttg
tctgactccagcagtgaaaagaccgatcaagaggatgcacctgaggaggccagcgaaaat
aaagtcaccccgaaaggacgcaaaaagattcgcagaattattgaagatgaaaaccttcgt
gctgagacccaggaagccctgagagaggaggaggagagatgcaaacgtttggcaaatagg
gatcaacagatggaggacaggagagagatcattgtcatagaggatgagctgtctcaagtg
gtgtgtcccgtcacaaccaagctggtcctggatcaggatgaggagaccaagaagcctctc
gttcaggtgcacagaaacctggtcacaatactgaagcctcaccaagtggacggcgtccag
tttatttgggatagttgttgtgagtctgtgaagaaggccaactcctctcctggatcaggc
tgtgtactggcacactgcatgggcctcggaaagactctgcaggtggtaacgttcctccac
acagtgttgctgtcaacagaactgaaatttagaaccgctttggttgtgtgtccgcttaat
accatcctcaactgggtcagtgagttcaagaaatggcaaaacaacatgggggaagataaa
gtcaaggtgacagaactggctacaatgaaacataccttaggtcgactcagagctctgcag
aggtggcagagagacggaggtgtgatgataatggggtatgacatgtaccgcatcctgtca
ttagactgtaaaatcaacaacgacgagtggaaggaggagttttatcgcacacttgtggat
ccaggtcccgactttgtggtttgtgatgaggggcacatcttgcgtaatgatggctctaat
atctccaaagctatgaatgccatcaaaactcaaagaagagtggtgctgactggcacgcca
ctgcagaacaacctcgttgagtaccactgcatggtcaatttcatcaagaagaaccttctg
gggtcactgggcgaattcagaaaccgcttcatcaaccccatagagaacggccagtgcgct
gactccaccccgaaagatgtccgaatcatgaagaagcgagcacatgtactgcattcagta
ctgggcggatgcatacagagaagagattactcggagcttcgacagtttctgcctccgaag
tatgagtatgtgctggcagtgagggtttccccacttcagtataatctataccgatactac
cttgaccatttcacaggtgtaagctccttacataacagcaaaaagatgaggcctggagca
aacctgttcaaggactttcaggtcctcggccgaatttggactcatccgtggtgccttcag
ctcagctacctgagcaaattaaaaaagaagagtaaaggtaaagcagcagatctgcccaag
aatgcagagacccctatgactgaggctgagggctggtgtgaaggaatgaaagagaacgaa
ggacaagaagggaataacactcacagcagcacagtgattattgatgatttcaaagttgtc
caaacagtggaagcagtcgagaccgcacccatcaggttgaagcctccgagtcccgatgag
cgctggtacaaggatcttctctctgaaagagatgccaaaatcctggagcactcagggaag
atggtgctcttgtttgagatcctgagaatggctgaagaactggaggataaagtgattgtg
ttcagtcagtcgctgatctcattagacctgattgaggattttcttgcggattctcaccgt
gccagagacccatcagcattcaaagcgggcagctgggttaaaaatgttgattattaccgc
tttgatggttccaccagtgctacactgaggaagaagtgggcagatgagtttaacaatcct
gaaaatgtccgcggccgattgttcctcatctcaacaaaagctggctcacttggcatcaac
ctggtggctgctaacagggtgatcatctttgatgcttcatggaatccctcgtatgacatc
cagagcatttacagagtgtaccgctttggtcagctgaaacaagtgtttgtgtaccgcttc
ttggcccagggcaccatggaggagaaaatttatgatcgtcaggtgaccaagcagtcgctg
tccttccgagtagtagatcagcagcagattgagagacacttcacctttcatgagctgact
gaactttacacattcgagccagacctgctcaacgatccaaactctaagaaaagcaagaga
ccggcttctgtgttgccactggatacagttctggcacagctgttagaagactgcaaagac
cacatagtgacttaccatgagcacgaatccctgctggaccataaacaagacgaggagctc
agtgaggcagaacggaaagctgcttgggatgagtatgaagctgagtcacacccagccagt
gttccagagacctctcaccaagatgatttggatttaaagaccaatgagcagctattggaa
ctgcttaacaaaagcagaacaactgtttcactgaccttcatggcactgcagaaaatgagg
attcacactgttgaggaatacatgtttctaatgcggcagcagtacccccagttacctgag
gccgaggtaaagagcaaagctgaggtctggagacaatacgatctgaagaggcaggagcat
ttacatgctttttatcgagacgctcttggacagcaacaaacgctcacattcagaatacaa
agcatactgaacagtcgaagaaatgatgcgactcagatgactgtgaagcagcctggacag
acttga
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integrated database retrieval system
