Oreochromis niloticus (Nile tilapia): 100690471
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Entry
100690471 CDS
T06104
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04510
Focal adhesion
onl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100690471
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100690471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
100690471
NCBI-ProteinID:
XP_003448148
Ensembl:
ENSONIG00000017855
UniProt:
I3KN13
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All DBs
Position
LG17:complement(17390506..17422489)
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AA seq
1779 aa
AA seq
DB search
MSLIIHLLTTLALWAPVRAQQVPHFPDICTEGSCYPATGDLLIGRAHKLNASSTCGLNEA
ESFCIVGHLEETKCFVCDSREMYDEDSNDISHTIENVVTTFAPNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMMIERSMDNGKSWQVYRYFAYDCNLTFPGISTGPM
VRVDDIICDSRYSDIEPSTEGEVIFRVLDPAFDIDDPYSIRIQNMLKITNLRVKFMKLHT
LGDNLLDSRNEVKDKYYYALYDMVVRGNCFCYGHASECAPVDGAPTSAEGMVHGRCVCNH
NTEGLNCERCQDFYHDLPWRPAEGRNTHACKKCECNQHSTSCHFDLAVYVASGNVSGGVC
DDCQHNTLGRLCEQCAPFFYQHPSRNLRDPNICEPCNCEPAGSLEGGLCDPRTDVIAGLI
SGQCRCKANVEGERCDHCRQGHYGLGQGPHGCLPCTCNPLGMLPGGNPCDSGTGRCFCKR
LVEGHNCDQCRPQHWGLSNDMDGCRPCDCDQGGAVNNDCDPHTGQCVCREHMFGRRCDQV
ESGYYFMALDHYTYEAEDAKYGPGVTLVPRPYPEGRSPTWTGMGFVNVPEGTYLEFSIDN
IPESMDYDILIRYEPQLPEQWEEVNIQVQRPVFNLPNYSSHCSNSFQSGDQQSISLPPGS
RHVLLVRPVCFEKGLNYTIQLNLPFYSSVSTVQSPYTLIDSLVLMPRVRELEMFHGDVGE
QAWDTFQRYRCLENSQSIIKSPMTDICKQYIFSASALLHKGAMACQCDPQGSLSSLCDPN
GGQCQCRHNIAGRNCDRCAPATFLFGPAGCRPCNCDPLGSVSALCHEATGHCECVPGATG
RQCSHCLPGFWGFPHCRPCQCNGHSEYCHPQTGECQGCRDFTTGHHCERCLSGYHGDPEL
GSGGYCRPCMCPDGPRSGRQFADSCYLLPNTNQLVCVCSPGYKGVRCDECAPGYFGNPLV
PGGRCMPCQCNNNIDMHDPDSCDARTGTCLKCLYHTQGDGCQHCKLGYYGNAATQSCRKC
TCYSVGTIPYACSSPDECQCDQRSGQCPCLPNVVGQNCDRCAPDTWNLASGTGCQRCDCD
PVHSFKSSCHEVTGQCMCKPGFGGRTCRECKELFWGNPEVKCYACDCDHRGISSEQCHRA
TGQCTCVEGVTGPRCNECARGYHGEFPDCKPCHKCFAAWNTVVEELTNQSRRLEAKVNEL
QTVGVTAPYKELISSLERNAKAVRDILESNPATVKLEQIQELMHQITGVMSYLNGKLNTT
EEALDLLQSDANATDADLDVLTVEANQLEMSVQRLRQQVDDAKNANIHGALETITAAHME
SRMAELRTNASTSDAGNTVEQSVAARKATEDKLSSRQKEFDRKQHRNMEKLDKLSKELDK
FSLSSLSEKICVGASEGDDGCSTCGGLGCTNEDGAPHCGGEECGGAVTTVHKSLNSANEL
EQAILEAMQEVDKLSRMVWEANIRANEAKANALGMLIKSNQSKERVEQSNEQLRNLIREI
RDLLMNEKADASVIEALANEVLALEMPTSAEKLKELTDEIREKVTTLTSVETILSQSAED
VKAAELLLKEAKAASEKASNMKDTAEVVKSALDETDRAQSVAMDAIELAQNNTKGTMDLL
NAVESETAKSELKLSNTTGRLLQLEREVGLLRQNNLEMKEIMVSTERTTQQAKQDADEAE
QEFNEKLKDKFAEVEDQVEVKGESVQQAKKRADELQQEAIELLNQSSRKLERLKELEVSY
VDNQHILEAKAKELAELEQTARNMLEEISRKVALYSTCL
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcataatccaccttttaaccactttggccctgtgggctcctgtcagggcacag
caggttccgcacttcccagatatttgcaccgagggcagctgctacccagccacaggtgac
ctgctgatcggcagggcgcacaaactcaacgcctcctccacctgcggactgaatgaggcc
gagagcttttgcatcgtgggacacctggaggagacaaaatgttttgtgtgcgactccagg
gagatgtacgatgaggacagcaacgacatcagccacaccatcgagaacgtggtcaccacc
ttcgctcctaaccgcctcaagacctggtggcagtcagagaacggtgtggagaacgtgacc
atccagcttgacctggaggcggagtttcatttcacacaccttatcatgaccttcaagacg
tttcggccggctgccatgatgatcgagcgctccatggacaacggaaaatcgtggcaggtt
tatcgttactttgcctacgactgcaatttgaccttccctggcatttccaccgggcccatg
gtcagagtggacgacatcatctgcgactcccgctactctgatatcgaaccatccaccgag
ggagaggtgatttttcgggtgttggaccccgcgtttgacattgacgacccctacagcata
aggatacaaaacatgctgaagatcacgaacctcagggtgaagttcatgaagctccacact
ctgggtgacaacctgctcgactcccgcaacgaggtgaaggataagtactactacgccctc
tatgacatggtcgtccggggaaattgcttctgctatggccacgcctccgagtgtgcccca
gttgatggagcgccaacaagtgcagagggcatggtccatggccggtgcgtgtgcaatcac
aacactgagggactgaactgcgagcgctgccaagacttttatcacgatttgccttggagg
cctgcagagggacgaaacacccacgcctgcaagaagtgtgaatgtaaccagcactccacg
tcgtgccacttcgacctggccgtgtatgtggcgtccggcaacgtgagcggaggcgtgtgc
gacgactgtcagcacaacacgctgggccgactgtgcgagcagtgcgcgccgttcttctac
cagcaccccagcagaaacctgagggacccaaacatctgtgaaccctgcaactgcgagcct
gccggttctctggaaggcggtctgtgtgacccgaggacagatgtgattgccgggctgatc
tcaggtcagtgtcgatgcaaagccaacgtggagggagagcgctgcgaccactgcagacaa
ggacactacgggctgggacaagggccacatggctgcctgccttgtacctgtaatccgctg
ggaatgctgccaggaggaaacccgtgtgattcaggcacaggacgctgcttctgcaaacgc
ctcgtcgaaggacacaactgcgatcagtgtcggccacagcattggggtctgtccaatgac
atggatggctgcagaccatgtgactgtgaccagggtggggctgtcaacaatgactgcgat
cctcacacaggacagtgtgtgtgcagggagcacatgttcgggcgccgctgcgatcaggtc
gagtccggctactacttcatggctctggatcactacacatacgaggcagaggacgccaag
tacggccctggtgtgacgctggtacctcggccctatcctgaaggtcggagtcctacgtgg
actggtatgggcttcgttaatgtgccagaaggaacctatctagagttcagcatcgacaac
atccccgagtccatggactatgacatccttatacgctatgagccacagctaccggagcaa
tgggaggaggtgaacatccaagtgcagcgccccgtcttcaaccttccaaactactccagt
cactgcagtaactctttccagagtggagaccagcagtcgatctctcttccacctggatcc
agacatgtgttgttggtgaggccggtgtgttttgagaaagggctgaactacacgatccag
ctcaatctgcctttctactcgtcagtcagcaccgtccagagcccatacacactcatcgat
tcgttggtgctgatgccccgtgtcagagagctggaaatgttccacggggacgtgggagag
caagcatgggatacgttccagcgctatcgatgtctggagaacagccagagcatcataaag
agccccatgaccgacatctgtaaacagtacatcttcagtgcctctgccctcctgcataaa
ggagccatggcttgccagtgtgaccctcagggttcgctcagctccctgtgtgaccccaat
ggcggtcagtgccagtgccgacacaacatcgcaggcaggaactgcgaccgttgcgcccca
gctaccttcctgttcggccctgccggctgcagaccttgtaactgtgaccctctgggctct
gtcagcgccttgtgccacgaggcaaccggccactgcgagtgtgtcccgggggccacgggt
cgccagtgttcacactgcctgccgggcttctggggcttccctcactgccgaccgtgccag
tgtaacggccacagcgagtactgccaccctcagactggagagtgtcagggctgcagagac
ttcaccaccggacatcactgcgagaggtgtttgagcggttaccacggtgacccagagctg
ggttcaggcggatactgtcgtccttgtatgtgtcctgatgggccacgcagcggacgccag
tttgcggacagctgttaccttctgcctaataccaatcagctggtgtgtgtgtgcagcccc
ggatacaaaggtgtcaggtgtgacgagtgtgccccgggttactttgggaatcctctggtg
cccggtgggcgctgcatgccctgccagtgcaacaacaacatcgacatgcacgacccggac
tcctgcgacgctcgcaccggcacctgtctcaaatgcctgtaccacacccagggcgacggg
tgccagcactgcaaactgggttactatggcaatgctgccacacagagctgcaggaagtgc
acgtgttattcagtagggacgattccttatgcctgttcgtcccccgatgaatgtcagtgc
gaccagcgcagtggccagtgtccctgcctgcccaacgtggtcggtcagaactgcgaccgc
tgtgctccagatacgtggaacctcgccagtgggacgggctgccagcgctgcgactgcgat
cccgtccactcgttcaaatcctcctgccatgaggttacaggacaatgcatgtgcaagccc
ggttttggtggccggacgtgccgggagtgcaaagagctcttctgggggaatccagaggtc
aaatgttatgcttgtgactgcgaccaccgggggatctccagtgagcagtgtcatcgtgcc
acagggcagtgtacctgtgtggagggcgtgacgggcccccggtgcaacgagtgtgctagg
ggttaccacggtgagttccctgactgcaaaccctgccacaagtgctttgcagcttggaac
accgtggtcgaggagctgaccaaccaatctcgccggctggaggccaaagtgaacgagctg
cagaccgtcggagtgacggcgccgtacaaagagttgattagcagtctcgagagaaatgcc
aaggctgtcagagacatcttggagagcaaccccgccacggtgaagctggagcagatacag
gagctgatgcatcagataactggcgtgatgtcctatctaaatggaaagctcaacacaacc
gaggaggctttggaccttcttcagagtgatgcaaatgccaccgatgcagatttagacgtg
ctgactgttgaggcaaaccagttggagatgagcgtccagaggctgagacagcaggtggat
gacgccaagaacgccaacatacatggtgccctggagactattactgctgcacacatggag
tctaggatggcagagctgcgcacgaacgcctctacgagcgacgctggcaacacagtcgag
cagtcagttgcagcccggaaagccacggaggacaaactgagcagcaggcagaaggaattt
gaccgaaaacaacacagaaacatggagaagctggacaagctgtccaaagagctcgataaa
tttagcctgtcttcactaagtgagaagatttgtgttggagcctctgaaggtgatgatggc
tgctccacctgtggtgggttgggctgcaccaacgaggatggagcgcctcactgtggagga
gaagagtgtggaggcgctgtcacaactgttcataagtctctcaattcagccaatgagctg
gaacaggctatcctagaagctatgcaggaggtggacaagctctccaggatggtgtgggaa
gcgaacatccgagcaaacgaagccaaagcgaacgctctggggatgctgatcaaatccaac
cagagcaaagagagagtggagcagagcaacgagcagctccgcaacctcatcagggagatt
cgagatcttctcatgaatgagaaagcagacgcatccgttatcgaggccttggctaacgag
gtgttggctctggagatgccgacgtcggccgagaagcttaaggagctgacggacgagatc
agggagaaggtcaccactctgaccagcgtggagacgatcctcagtcagagcgcagaggac
gtcaaggcggccgagttgctactgaaggaggctaaggctgcaagcgagaaggcgtctaac
atgaaggacaccgcagaagtagtgaagtcggccctggacgagaccgaccgcgctcagagc
gtcgccatggacgccattgagttggcccagaacaacaccaagggcaccatggacctgctg
aacgctgtggagtcggagacggccaagtcggagctgaagctcagtaacaccacgggccgc
ctgctgcagctggagagggaggtcggcctgctgagacagaacaacctggagatgaaggag
ataatggtgtcgaccgagcggacgacgcagcaggccaaacaggacgcggacgaggcagag
caggagttcaacgagaagctgaaggataaattcgctgaggtggaggaccaggtggaggtt
aaaggggagtcggtgcagcaggcgaagaagagggcagacgaactgcagcaggaggccata
gaactgctcaatcagagcagcagaaagctagaaagactgaaagagttagaggtctcctac
gtggacaaccagcacatcctggaggctaaagctaaagagctggctgagctggagcaaacc
gcccgcaacatgctggaggagatcagccgcaaagtagcgctgtacagcacctgtttgtga
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integrated database retrieval system