Oreochromis niloticus (Nile tilapia): 100690496
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Entry
100690496 CDS
T06104
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
100690496
Cell adhesion molecules [BR:
onl04515
]
Cadherins
Protocadherins
100690496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Fibulin_C
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
100690496
NCBI-ProteinID:
XP_003455500
Ensembl:
ENSONIG00000016069
UniProt:
I3KGJ9
LinkDB
All DBs
Position
LG16:complement(17859408..17872230)
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AA seq
1091 aa
AA seq
DB search
MRLSVPVFLLLWVKALTLKNLNYSVPEEQGPGTVIGNIAKDAGYGTMERGKKSNFRVLEN
SAPHLVDVDPESGLIFTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKIDIQDINDNS
PSFPSDHVNIDISENAAAGTRFPLTIAHDSDSGENGIKTYQVTRDDYNTFSLDLKVRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFEKSSYV
LEIPENSPPGKVLIDLNATDQDEGSNGQVVYSFTGYASERIQDLFSIDPNTGVIKVQGEI
DYEENPIIEFDVQAKDLGPNPIPGHCKITVKVLDKNDNSPIISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDREMKDEYNVTIVA
RDNGIPSLNYTRSFTVKILDENDNAPRFTKAVYVLQVPENNIPGEYLGSVLAHDPDVGRN
GTVTYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKSFEFKVQAKDGGSPHMES
TSTVRVSVLDVNDNLPVIILPLLQNDTAEIPVPRNVGIGYIVATVKAVDHDHGESGHLTY
EITEGNDDHLFEMDPVGGEVRTAHALWEEVTPVVELVVKVTDHGKPPLSAVAKLIIKANT
DTATGGGSSASGEQQHWDVSLPLIVTLCIISVMLLAVMTAIAVKSKHQDKEAGNYNCRMA
EYSNPPVGKGKKKRINKSDIMLVQSEMEERDSASRMNVVSSPSLITSPICFDYQSPLPLT
LPRSEVMYLKTTPNSLTVPRAGCHSSFAGLSTDTPANRMSVIQTENFPSEPNYAGSRQPF
VQSSTFKDAERASLRDSGHGDSDQADSDQDTNKGSHCDTSAREALKMKATAVNGQPFEQE
QDKSVHCTDECRALGHSDRCWMPKLRVGSQADSADNRTNLFIPVGMDAMVETEIYGTISC
NSRKTLSTFGKEQRDSTILVANVKPYLKSQRALSPPLQESPSASSSPTKSSVPPDLANQE
SKEVRDGGSDSSAYGPPDGQCSPLHTELEEPSYLTCELRPKSLSSSLIHSSVISQECGGS
DCALDPRDSGN
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctctgtacccgttttcttactgctgtgggttaaagccctgacattgaaaaat
ctcaattattctgtcccggaggagcaaggacctggaactgttatcggtaatatagcaaaa
gatgccggatatgggaccatggagagagggaaaaaatcaaacttcagagtactggagaat
tcagcaccacatctggtggatgttgacccggagagtggactaatcttcaccaaacaaagg
attgacagggagacattatgcaggcgtaacccaaagtgccagctgtctatggaagtgttt
gcaaatgacaaggaaatatgcatgatcaagattgatatacaggacataaatgataactcg
cccagtttcccttcagatcatgtcaatattgatatttcagaaaacgcagctgctgggaca
cgctttcctctcactattgcacatgactcagattctggggaaaatgggataaagacctac
caggtcacaagagatgattacaatacattttctctggatttaaaagtgagaggcgatggg
actatatatccggagctggtggttcagagacctctggatagggaggatcagagtcatcac
accctccttctcacagcaatagatggaggggagtatccaagatcgggctccatgcagatc
aacgtcagagtgactgattcgaatgacaatagcccggtttttgaaaaatcctcttatgtt
ttagagattccagagaattctccccctggaaaagtacttatagatttgaacgccactgat
caagatgaaggaagtaacgggcaggtggtgtattccttcactggatatgcatctgagcga
atacaagatttgttctccatcgaccccaatactggcgtcatcaaggtccagggagagatt
gactatgaagagaatccaatcatagagtttgatgtgcaggctaaggatctggggcccaac
ccgataccaggccactgtaaaattactgtcaaagtgcttgacaaaaatgacaactcgcca
ataattagttttgtttctgtccggcagggagccatcagcgaggcagcgcctccagaatct
gtcatagcgctggtcagagtgacagataaagactccggccgtaatggtcaacttcagtgc
cgggtactaggaaatgtacctttcagactgcaagaaaacaatgacaatttttatacactg
ctcactgatagacctctggacagggaaatgaaagatgaatacaatgtaacaattgtagcc
agagataacgggatcccttctttgaattacactaggtcatttactgtaaaaatcttggat
gaaaatgacaacgcaccacgctttacaaaagcagtgtatgtgctacaggtgcctgagaac
aacatcccgggggagtatttgggctccgttttggcccacgacccagacgtgggtcgaaat
gggacagtgacgtactccattcttccatcacatataggagatgtttcagtctacacatat
gtgtctgttaatcccaccaatggagccatatatgcctcccgctctttcaattatgagcaa
actaaatcatttgagttcaaagttcaggctaaagatggaggatcacctcacatggagagc
acttctacagttagagtcagtgttctcgacgtcaacgacaatctcccggttattatttta
ccgcttcttcagaatgatacagcggaaatcccggtgcctagaaatgtaggcattggatac
attgtggctacagtgaaagcagtagaccatgatcatggagaaagtggacatttgacctat
gagatcacagagggaaacgatgaccacctgtttgagatggatccagtgggcggagaggtc
agaactgcccatgctctttgggaggaggtcaccccagtggttgagctggtggtgaaggta
actgaccatggcaagccccccttatctgccgtggctaagctgatcattaaggcgaacaca
gacacagcaacaggagggggatccagcgcgagtggggaacagcagcactgggatgtgtcc
ctgcccctcatagttaccctttgcattatctctgtcatgctcttagcagtcatgaccgcc
atcgctgtcaagtccaagcatcaagataaggaggctgggaattataactgccgcatggct
gagtactccaatcctccagtggggaaggggaaaaagaaacggatcaacaagagtgacatc
atgctggttcaaagtgagatggaggagagagattctgcgagtcgaatgaacgtggtgagc
agcccgtctctcatcacctcgccaatttgttttgactaccagagccccctgccactcaca
ctccccaggtcagaggtcatgtacctgaaaaccaccccaaacagcctgacagtccccagg
gcaggttgccactccagctttgccgggcttagcacagacactccagcgaataggatgtca
gtgatacagactgaaaattttccctcagagcccaattatgctggcagcaggcagccattt
gttcaaagctcaacatttaaggatgcagaacgagcaagcctccgagacagtggccatggt
gatagtgaccaagctgatagtgaccaggatactaataaaggctcacactgcgacacgtct
gccagggaggccctcaagatgaaagcaacagcagttaatggccagccttttgagcaggag
caagacaaatcagtccactgcaccgatgaatgtcgtgcactgggacattctgacagatgc
tggatgccaaagttacgggtaggaagccaagcagacagcgccgataatcgcaccaacctt
ttcatccctgtgggaatggatgccatggtagagacagagatttatggcaccatcagctgc
aacagcagaaaaaccctcagcacgtttggaaaggaacagcgggacagtacaatccttgtg
gccaatgtcaaaccttacttaaaatcgcagcgtgcactaagcccaccgctccaggagagt
ccatctgcgtctagtagtcccaccaagagtagcgtgcccccggacttggccaaccaagag
tccaaagaagtgagggacgggggttcagacagcagtgcctatggccctccagatggccag
tgctccccactgcacacagaattggaggagccctcctacctgacctgcgagctcaggccc
aagtccctgtcaagcagtctcattcacagctctgtcatcagccaggagtgtggggggtca
gattgtgctctcgacccccgggactctggtaactga
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