Oreochromis niloticus (Nile tilapia): 100690525
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Entry
100690525 CDS
T06104
Name
(RefSeq) LOW QUALITY PROTEIN: protein Shroom3
KO
K18625
protein Shroom
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
onl04812
]
100690525
Cytoskeleton proteins [BR:
onl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
100690525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASD2
ASD1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
100690525
NCBI-ProteinID:
XP_013123993
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Position
LG7:complement(33366709..33436602)
Genome browser
AA seq
1996 aa
AA seq
DB search
MERGGRAGLQQAAGGGGEGGGWVLVEARLQGGAPWGFTLQGGLEHGESLIISKVEEGGKA
DSLEQPLRVGDEIVIINDIELTGYRQEAIALIKGSYKTLQLTVRRELDPGYIEEFMPSTA
SLPALPAPPPPSSFPSPPPQEQQQQKTHRSSRHSPPCSAVQLRIRNRRAEPASRPHSWHS
SKLDEGQQELDPGAMDSMSSTWHHNYHASVSTNDLSGGFDSGYLRKSPDQYSSRGSMDSL
DHPQSSQLHSGAQHQHSLGHHRLSGPHPAYSSCHQLSSARSSNSIEHLHSKRDSAYYSFS
TSSSIQEYHASTPSISPERSSSLDTVPQRAGGSGEMHQSDMRYAPSVYDTQQGIFQEHEL
SSNSAVFLRNSDSRGGARSGIGRDPQASASGVCYRGSSSSTSGAPASNRHSVGPIWAPAA
NRSSYESLKGAPAPPRRSDSYAVIRNHERPNSWSSLEHARSLRSLQKGSWHHSSGNVASA
KGSYGAEGQLHTVIEKSPESSPTTRPVRVGFPQPPSPTGPSSGSADPTPQASRLILPTSI
YPVPQPEPHYAQMPNSPSPGPSGVYPALAKESNRQQQHEGATEGQRDGRMSATENGYPTN
TSSYPHSSYPTDRHQQEESNFGPYNPHIKTTGGGTESEIVVQRAQNHQSVQEQKQDFHIP
QNYSAPELRRASPQERSDPYAPVQSWGDQNRSVDQSSVHSEPVASSRLTHGQVPPNHSPG
QPQAQAPPSSASHHSPRHLSDSSALQYQNWDHREQDKDKEHPLTRLELALAEVQRCGSPE
SDAPQGPARSLSVLEKVSRFERQQRNGKQRSHSTSHNKAHLRNQITDKGRSAPCGTEDLR
NMLERSTKGIKVQRTPSYRGGSSEHMKPRTPTDPVSALQRSRSSFHLDGSKEEDSSKDFP
WRQEIQEIMAPMQDTSTNRSYRDSLKDAQSKVLRSTSFRRRDLTSSGSAQPPPAPPSVSS
SGSQQPPPVPPKYHSLEKKGPTTMPKPRGIVITPQSQPLVTSPHTPKERHVVTPDVRGPS
PPPLPSVPPVGQPALPRICGRKRLTADQKKRSYSEPENMNEVGISDPETVSLFRRGGETS
VADRRKMFEPAAGSVGSGASQNAISRSDLRQVQQEALAKYMERRRGVRKDEGAQRSISRP
RSAYFQPENVNHAASSCYSDTVSLSSASSLLSLQDPFPASPQGEKHPDSTLLPDLRSHQS
NFFYPGRVTTPRPPAHPPSSTPSGSSLDQIYQDLVPEAELRRHSQSSIREPSLSREQQVA
EPQVNRELSKQLNVALQKAGSAHKTGKSASAENLLERSEDTRAPPQHFRSRSSPIMERLN
EDFLPDDVRMFGVFISEHERCALAADRPANVHVPEGFISPSQNSMNTSQPIGPSKGVSQT
PVIRKERQRNSERQRAQSTSTLAASVGLPYPLSQPRTQERGSDEWQSSERLSQANLAGIT
FPGIQQTSVGSGEESDVSGVEHEKQSRHSLSDATLLEDTAKHTYRGRASSLEMRGGLSEE
NVKPVSPVTPTSPKRKGSGSSTSSPLPFSHPTVHLSSLRISETSLFGSVSQQQPPETSTG
TPLEDYDEVFLQNPAPPPPPFSPPIRETNITEDFPPPPPPVELEQETKEETVGSSTSEFS
TISTRKSFPQSLPVSSSSVPSQLPSLEPSTITPTTTSATTEDNLSLEYQPLPKREKTSEE
LRVEALAQQLVLQDPSLAPLLDTWGGKSTIELLEEIFPNSKLFGKSQWTHGGSGQEDDRT
QAGICDPAQSTAADQKTETNLDEEDKDLNTRKVELCEALRRSVVALKQEKEALCEEQKHH
KSLGDSIETMVQDHLKTNEKDKYSVFIGDLERIVNLLLSLCSRLSRIDRSLLALQRDGLS
PEEAAEERDSLNHKRSLLLRQTEDARELKENLDRRQRVVHAILSSYLSEPQLQDYRRFVS
TKPSLLIRQRHLDDLIRRGEEQLTRLAESLPAELAEANGWPAASPVPCSSLFPPLLPPAT
IISPSHMVRSTTVTSL
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atggagagaggtggccgggcggggctccagcaggcggcgggcggtggaggagaaggaggc
ggctgggtgttggtggaggcccggctgcagggaggagcgccgtggggcttcaccctgcag
ggtggcctggagcacggagagtcgctcatcatctccaaggtcgaggaaggcggtaaggcg
gacagtttggagcagcctctgcgggtaggcgatgagattgtcatcatcaatgacattgag
ctgaccggttaccgtcaggaggccatcgctctgataaaaggatcgtacaagactctgcag
ctcaccgtccgcagggagcttgatccgggatacatcgaagagtttatgccttcaacggct
tctcttcctgctcttcctgctcctcctcctccttcttcctttccatcgccaccaccacaa
gaacaacagcaacaaaaaacgcaccggtcatcacgtcacagcccaccatgttcggcagtc
caactacgcatcagaaacagacgcgctgagccggcatctcgtcctcattcatggcattca
tcaaagctcgatgaaggccagcaggagctggacccaggagcaatggacagcatgagcagc
acgtggcaccacaactaccacgccagtgtctcgaccaacgatctgtccggcggattcgac
tctggctacctgaggaagagtccggaccagtacagctccaggggcagcatggacagtctg
gaccatccccagtcctcccagcttcactctggagctcagcaccagcactcactgggccac
cacagactcagtggaccccacccagcctactcctcctgccaccagctgtcctcagccagg
tcgtccaacagcattgaacacttgcacagcaagagagactctgcctattactctttctcc
actagctccagcatccaagaataccacgcctccaccccctcaatcagcccagagcgctcc
agttcactggacaccgtccctcagagagcagggggaagtggcgagatgcaccagtctgac
atgcgttacgccccgtcagtttacgacacccagcagggcatctttcaggagcacgagctg
agctccaactctgccgtgttcttacgcaacagcgactccaggggcggagccaggtcaggg
ataggtcgagatccacaagcttcagctagcggggtctgttaccgtggcagcagcagcagc
accagtggtgcaccggcatcaaacaggcacagtgtaggaccaatatgggccccggcagcg
aaccgcagctcctatgagagcctgaagggggcgcctgctccaccaaggcgcagtgatagt
tatgccgtcatcaggaaccacgagagaccaaactcctggtccagtctggagcacgccaga
tcactacggtctctgcagaaaggctcctggcatcactccagtggtaacgttgcctcagct
aaaggctcgtatggtgctgagggtcagctccacacggtgatagagaagagtccagagagc
agccccaccacaaggcccgtcagggtgggctttcctcaacccccgtcccctaccgggcct
tcctctggatctgcagaccccacgccacaggccagccggcttattcttcctaccagcatt
taccccgttccccagcctgagccacactacgcacagatgcccaactcccccagcccaggc
ccctctggagtctacccagccttggccaaggagagcaaccggcaacagcaacatgaagga
gcaacagaggggcagagagatggaaggatgtcagccacagaaaatggatacccaactaac
acttcatcctacccccacagctcttacccaacagacaggcatcaacaggaagagtccaac
tttggaccctacaacccacacatcaaaactactggagggggaacagagagcgagatagtg
gtccaaagagcccagaatcatcagagcgtccaagagcagaaacaggattttcatattccc
caaaattactcagcccctgaactcaggcgtgcatcaccacaggagaggagcgacccctat
gcacctgtccagtcctggggagaccaaaacagatcagtagaccagtccagtgttcattca
gagccagtggcatcttccaggctcacccatggacaggttccacccaaccactcacctggt
cagccccaggctcaggctccaccctcttccgcctcacatcattctccccgccacctcagc
gattcatccgctctgcagtaccagaactgggaccacagagagcaggacaaagataaagag
catccactgacacgcctggagctcgcccttgccgaggtccagcggtgcggcagccctgaa
agcgatgccccccaagggcccgctcgcagcctctccgttttggagaaagtgagtcgcttc
gaacgtcaacaacgcaacggaaagcagcgcagtcacagcacctcgcacaacaaggcccat
ctacggaatcagatcacagacaaaggccgcagtgccccttgtggaacagaggacctcaga
aacatgctggagagaagcaccaagggcatcaaagtccaaaggactccgagctacagagga
ggcagcagtgagcatatgaaacccagaactccaacagatccagtttcagccctgcagagg
agtcgcagcagcttccatctagatggatccaaggaggaggacagcagcaaggacttcccc
tggagacaagaaatccaagagatcatggccccaatgcaggacacatccacaaacagatct
tacagggactccttgaaagacgcccagtctaaggtcctacgatccacctccttcagacgg
agggacctcacctcatctggcagtgcccagcctcctccagctcctccttctgtctcctcc
tccggcagccagcagcctccacccgtccctcccaaataccactcactggagaaaaaaggc
cccacaaccatgccaaagccacggggcattgtcatcacgccgcagtcacaacctctggtc
acttcccctcacacccccaaggagaggcacgtggttactcccgatgttcgaggccctagc
ccgccacccctccccagcgtcccacctgttggacagcctgctctaccgcggatttgtggc
cgcaagcgtttgacggcagaccagaagaagcgctcatactcagaaccagagaacatgaac
gaggttggaatttctgacccagagactgtgtccctattccgacgtggaggagaaaccagt
gtggcagaccgtcggaagatgtttgaacctgctgcaggttcagttgggagtggagcttct
cagaatgccatttcaaggtccgacctgcgacaagtgcagcaagaagctctcgccaagtac
atggagagaaggagaggcgtgaggaaagatgagggagcacagaggagcatctcgaggcct
cgcagtgcttattttcagcctgaaaatgttaaccatgcagcctcctcctgttactcagac
accgtcagcctctcctccgcttccagcctcctctccctccaagacccatttccagcttct
cctcagggggagaagcaccctgactcaaccctccttcctgacctgcggagccaccagtct
aacttcttctacccaggcagggtcaccacaccgaggccaccagctcacccaccgtcaagc
actccttctggctccagtcttgatcagatctaccaggatcttgttcctgaagcagagctc
aggagacacagccagtcatccatcagagagccgagcctgagccgtgaacagcaggtcgca
gagcctcaagtcaaccgggaactgtctaagcagctcaatgttgctctgcagaaggctggg
tcagctcacaaaaccgggaagtcagcctcagctgagaatctcctggagcgatctgaggac
acgcgagccccccctcagcactttcgctctcgttcatcccccatcatggagagactaaat
gaggacttccttccagacgatgtccggatgtttggcgtcttcatctccgaacatgaacgc
tgtgctctggctgccgacagacctgcaaacgtccatgtaccagaaggcttcatctctcca
tcccagaacagcatgaacacctcccagcccataggaccctctaaaggcgtctcccaaaca
ccggtcattcgtaaggaacggcagaggaacagcgagcgccagcgtgcccaaagcacctcc
accttggcggcctctgttggcctgccctaccccttgtcccaacccaggactcaggaaaga
ggcagcgatgagtggcagtcaagcgagaggttgagccaggccaatctggccggcatcact
ttccctggcatccagcaaacgagtgtaggcagtggtgaagaaagtgacgtttctggtgtt
gaacatgaaaaacagagtagacacagtttgagtgatgccaccctgttagaggacactgca
aagcacacttacagaggcagagcctccagtttagagatgagaggcggactttctgaagaa
aatgtcaaaccagtgtccccagtgacaccaacctcacctaaaaggaagggtagcggaagc
agcacatcctctccgctgccgttctcccatccgactgtccacctgtcctcactgcgaatc
tcagagaccagcctctttggctccgtcagccaacagcaacctcccgaaacttccacaggc
acaccactggaggactatgacgaggtcttcctccaaaatcctgcaccacctcctccacct
ttttctcctccaatcagggagacaaacatcactgaggatttccctcctccacctcctcct
gtggagctggagcaggagactaaggaggagacagtgggaagttccacttcggagttctcc
accatctccacaagaaagtctttcccccagtctttaccagtcagctcttcttctgtgccc
agtcaacttccttcattggaaccctccaccatcactccaaccaccacatccgccaccaca
gaggacaacctaagtcttgagtaccagccgctgcccaaaagggagaagacatctgaagag
ctgagagtggaggctctggctcagcagttggtgttgcaggacccctctctagcacccctc
ttggacacgtggggaggtaaatccactatagagctattggaggagatctttccaaacagc
aaattgtttgggaaatcacaatggacccacggaggcagcggccaagaggatgacaggacc
caggctggcatctgtgatcctgctcagagcacggcggcagatcaaaagacggagaccaat
ctggatgaagaagacaaggatctcaacaccaggaaggtggagctgtgtgaagctcttagg
cgcagcgtggtggctctgaagcaagagaaagaggcgctgtgtgaggagcagaagcatcac
aagtcgctgggggatagcatcgagacaatggtgcaggaccacctcaaaaccaacgagaag
gacaagtacagcgtgttcatcggtgatctggagaggatcgtgaacttgctgctgtctctg
tgcagccggctgtcgaggattgacagatctctgctcgctctgcagagagacgggctgtcg
ccagaagaagcagctgaagagagggactcccttaatcacaagcgctctctcctccttcgc
caaaccgaagacgctcgagagctgaaggagaacctggaccggcggcagcgcgtggtccac
gccatcctgtccagttacctcagcgaaccccaactccaagactaccggcgcttcgtcagc
accaagccctcccttctgatccgccagcgacacctggacgacctcatacgacggggagag
gagcagctgacgcgattggccgagagcctaccagcagagctggcagaggccaacggctgg
cctgcagcaagccccgtgccctgctcttctttgtttccaccactgcttccacctgctaca
attataagccctagccacatggtcagatctaccactgtgacatcactgtga
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integrated database retrieval system
