Oreochromis niloticus (Nile tilapia): 100690823
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Entry
100690823 CDS
T06104
Name
(RefSeq) serine/arginine-rich splicing factor 6 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03040
Spliceosome
onl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100690823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100690823
Spliceosome [BR:
onl03041
]
Common components
Common spliceosomal components
SR proteins
100690823
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
DbpA
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100690823
NCBI-ProteinID:
XP_005478376
LinkDB
All DBs
Position
LG20:24634369..24639163
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AA seq
396 aa
AA seq
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MPRVYIGRLSYHVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDGYGGGYWGGGRSSGYSSRSRSGRDKYGPPVRTEYRLIVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRTYSDMKRALDKLDGTDINGRKIRL
VEDRPRRRRSYSGSRSRSRSRRRSRSRRSRSRSSKSRSRSHSRSRSRSNKRRHHSRSRSE
RKSRSKSGERKSRSRTRRSRSRSNRSNKSKSRSRSRKSRSRSAEHKSKSRSKSRSKVKSE
RDSRSRSKERSAEKKSRSRSPSPVENGKEEHVAKSASRSPSPQEEECRSQSREKRSASRS
KSRSKSRSKSPSKSRSKSRSKSRSRSRSRSRSASQD
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagtttatatcggacgactaagctatcatgtccgcgaaaaagatattcagcgt
tttttcagcggctatgggaagctaatggagattgatttaaaaaacgggtatggattcgtg
gagttcgaagataatagggacgccgacgacgccgtttacgagctaaacgggaaggagctg
tgtggggagcgggtgatcgtcgagcatgcccggggcccgcgacgagaccgagatggctac
ggtgggggttactggggtggtgggcgcagtagcggttacagcagccgcagccgctctggc
agggacaaatatgggccgccagtccgcacagagtaccgcctcattgtcgagaacttatcc
agccgctgtagttggcaggacctcaaggacttcatgcgtcaggcaggagaggtgacctat
gcagatgcccacaaggaacgcactaatgagggagtgattgagttccggacgtattccgac
atgaagagggctctggacaagctggatggtactgacatcaacgggcggaaaattcgcctg
gtggaggatcgtcctcgcagacgtcggtcttactctggcagccgctccagatctcgcagt
cgtcggcgctcccgcagcaggagaagcaggagcaggagctcaaagagtcgctccagatcc
cactcgaggtctcgttcccgcagcaataagagacggcatcattcccgctccaggtctgag
agaaagtctcgctccaagtcaggagaacgcaaatcacgttctcgcactcgcaggtctcgt
tctagatccaacagatccaacaaatccaaatctcgttcacgctctcgcaaatctcggtct
cgctcagccgagcacaagtccaagtctcgttcaaagagccgctctaaggtaaagtcggag
agggattctcgtagccgatcaaaggaacggtctgctgagaagaagtcccgcagccgctca
ccctctccagtagagaatggaaaagaagagcatgtggccaaatctgcctctcgctccccg
tctccacaggaggaagagtgccgatcccagtccagagaaaagcgctcagcctctcgctcc
aagtctcgctccaagtcccgatccaagtctccctccaagtcccgttcaaagtcccgttca
aagtcccgctccaggtctcgctcacggtctagatcagcttctcaggattag
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