Oreochromis niloticus (Nile tilapia): 100690855
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Entry
100690855 CDS
T06104
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X2
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100690855 (npas1)
Transcription factors [BR:
onl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100690855 (npas1)
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
SAGA-Tad1
Motif
Other DBs
NCBI-GeneID:
100690855
NCBI-ProteinID:
XP_019200955
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All DBs
Position
LG14:complement(21930022..21967156)
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AA seq
800 aa
AA seq
DB search
MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLLEGDSNCSKVRRSSHSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHTAPESASSSASTSSLAGTPEPAPSSPHSPADDPPERGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSTRSVRRPMGLVALAHTLPPSTL
NEVRMESHMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFIHVEDLENLRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRTELPDTPL
DLLQLPESIRAERLRISSSPTDGSTQARGSQPVKSSVGKSDPDTKGRDKFTTTAIQSEDR
RKRLLRSDPEGAPPETRRRLEELRHTEESVSASSDLASESDGEEEDETEWDQGGDSDRLK
REDSGGGGKQSRGDTPTRGERGGRVHNGRAVIQQLKSVVSPSPLPGSPGIKTEHEALTTG
GRWGSHTQTSTSHTHTTQPQPSHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPPSP
ALSPAMPVSSPLPARTGLCRGWSAGAVAVVVVQVTVLTLSCFRDWLLVVQRAGSSSTPLP
SARRALRASMPQALSATLHLSSPLPTTTAQDTVMACSYARTTTRDPHRPSSPTYSGWPAF
HPSVVSPHLTAPSPLACPSV
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatgccatttgttagtgaggggaaatgtgtgagtgtggagtgggatttcctg
caaggacttctggccaagcctcccaccctgccctgtctccagaacctgcgtaaagagaaa
tctcgcaatgcggctcgttctcggcgggggaaggagaacttcgagttctttgagctggcc
aagatgctgccactgcccggggccatcacaagccaactggacaaggcttcggtcatccgg
ttgaccatcagctacctgcacatgcggacctttgccagtcagggggacccaccctggagc
cctctgctggagggagacagcaactgcagcaaagttagacgttcatctcattctctggcg
actgacatgtttgagcagcacctaggggcacacctcctgcagtctctagatggctttgtg
tttgtggtcagccaggagggacggttcctctacatctcagagacagtttctatctacctg
ggactctcacaggtggagctgaccggcagcagtgtgttcgactacatccacccagcggac
cacgtcgagatggcggagcggctgggaatcaggccacatctacgggccgaggccggctgt
cacacagcccctgagagcgcttccagctctgcgtccacctcctccttagctggtacccct
gaacccgctccatccagtcctcattctcctgccgacgatccacccgagcgtggctttttt
atccgcatgaagtccacgctcaccaaaagaggcctgcatgtcaagtcttctggatacaag
gtaatccacgtgacgggacgaatccgctgccgccccgctctcgtcccgggctccacccga
tcagtgcgtcgaccgatgggtttggttgcgctggcgcacactctcccgccctccacgctt
aatgaagtccgcatggagagccacatgtttgtcttccgagtgaacatggacctacaggtt
acatactgtgagaacaggatctccgagtatatggatctgactccagcagaggtagtggga
catacctgttaccatttcatccatgtagaagacctggagaacctccggcagagccacgag
gacttgctaagaaaaggccaggtagtgactgggtattatcgctggctccagaggagagga
gggtacctgtggatccagtccactgccacggtgtccatcaaccacaaagccccccatgaa
cgcaacgttatctgggttaactacgtcctgagtcgaacagagctgcccgacactcccctg
gatctgctgcagctaccagagagcataagagcagagcgacttcgaatcagctcgtccccg
accgacggctccacacaggcccgaggctcgcaacctgtgaagagctcagtggggaaaagc
gaccctgacactaaaggcagagacaaattcaccaccacggccattcaatcagaggacagg
aggaagcgcctgctgaggtctgacccggagggcgcacctcccgaaacccgccgcagactg
gaggagctccgtcacacggaggagagtgtctctgcctcctcagacctggcgagcgaaagc
gatggggaagaggaagatgaaaccgaatgggaccagggaggcgacagcgacagattgaaa
cgggaagacagcggaggaggaggtaaacagagcagaggagacaccccgacgagaggggag
aggggagggagggtgcacaatggccgggctgtgatccagcagctgaaaagtgtagtgagt
ccatctcccctgcccggcagcccaggcatcaagactgagcacgaagccctgaccaccggg
gggcgctggggatcacacactcaaacttccacctcgcacacacacaccactcagccccag
ccctcgcatgcacacacgccgtccagcagcctcaatggtgacagccccaccaccccgatc
ccggactcctcttccagcagcgaagccccgccgaagggtttgttcactcccccgtcccca
gctttgtcccccgccatgcccgtgtcctccccgttgcccgcgaggacagggctgtgtcgg
gggtggtcagccggagcagtggcggtagtggtggtgcaggtaacggtcctgactttgagc
tgcttcagagactggctgctggtagtgcagcgggccgggtcctcttccacccccttgccc
tcggcccgcagggccctcagagcctctatgccccaagcactatccgctacgctccacctg
agctccccccttcccaccaccacagcacaggacacagtgatggcctgcagctacgctcgg
accaccacaagggacccccaccggccttcttcccccacctacagcggctggccggccttc
cacccttcagtggtttctccccatctgacagccccttctcctctagcctgcccttctgta
tga
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